Alicyclobacillus dauci: NZD86_20750
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Entry
NZD86_20750 CDS
T08679
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
adau
Alicyclobacillus dauci
Pathway
adau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZD86_20750 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_20750 (uvrB)
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZD86_20750 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NZD86_20750 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
Microtub_bd
UB2H
AAA_16
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WAH39302
UniProt:
A0ABY6Z8Y9
LinkDB
All DBs
Position
complement(4139697..4141682)
Genome browser
AA seq
661 aa
AA seq
DB search
MQPGKFELVSEYKPQGDQPAAIDALVDGVDSGLRHQTLLGVTGSGKTFTMANIIAEVNRP
TLVMAHNKTLAAQLAAEFREFFPNNAVEYFVSYYDYYQPEAYIPSTDTFIEKDAKINDEI
DKLRHSATAAILERNDVIVVASVSAIYGLGSPKEYSEHVLSLRVGATIERNQILRRLVDM
QYERNDLNFTRGTFRVRGDVVEIFPASRDENAVRVELFGDEIDRITEIHVLTGEVVARRS
HVSIFPASHFVTSRPRLEQAMARIKDELRERLQELRSNDKLLEAQRLEQRTMYDLEMMME
IGFCSGIENYSRHLEGRGAGEPPNTLLDYFPPGFLTLVDESHVSLPQIRGMYGGDRSRKL
TLIEHGFRLPSAADNRPLTFEEFERTVGQCIYVSATPGPYEEEHQQRIVEQIIRPTGLLD
PTITVRPIKGQIDDLVGEIRERIRRSERVLVTTLTKKMAEDLTDYLKEIGIKVRYLHSDI
KTIERMVILRDLRKGVFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRAHRSLIQTIG
RAARNANGAVIMYADKITDSMRIAIDETERRREKQIAFNELHGIVPTTIHKAVRDVIEST
KVAEEAEDYVSVAEQAQSLGKRERKDLIAKLEQEMREAAKQLQFERAAQLRDMISELVDA
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccggaaagtttgaacttgtttctgaatataagccgcaaggtgatcagcctgcg
gccatcgacgcacttgtggacggggtggactctggtctgcgccaccaaaccttgctcggg
gttaccggttctggcaagacgtttaccatggcgaatatcattgctgaagtaaaccggccc
accctagtgatggcccataataagacccttgcagcacagctcgccgcggagtttcgcgag
tttttcccaaacaacgccgtcgagtattttgtcagttactacgattactaccaacctgaa
gcctacattccttcgacggatacgtttatcgagaaggatgcgaaaatcaacgacgagatc
gataaacttcggcactctgccacggcggctattttggaacgcaatgacgtcatcgtggtg
gccagtgtctccgccatttatggtttgggtagtccgaaggagtacagcgagcacgttctc
tcattgcgtgtcggtgcaaccattgagcggaatcagattctccgtcggctcgtcgacatg
cagtacgagcggaatgacttgaattttactcgcggcacatttcgtgtgcgaggtgacgtt
gtggagatcttcccggcatcccgggatgaaaatgccgttcgggtggagttgttcggggat
gagatcgaccgaattaccgagatccacgtgctcacaggggaagtcgtggcacgtcgttca
cacgtcagtatcttccccgcgtcccacttcgtcacgtccaggccccgcttggaacaggcc
atggcccgcatcaaggacgagttacgggaacgtctgcaggaattgcgcagcaacgacaag
ctgctggaagcgcaacgactggaacagagaaccatgtacgatcttgagatgatgatggaa
ataggcttctgttcaggcatcgagaactattcacggcaccttgaaggccggggtgccggc
gaaccgccgaacaccctcctggactatttcccgccgggattcctgactctggtggacgaa
tcccacgtcagcctgccgcaaattcgcgggatgtacggcggtgaccgatcgcggaagcta
acgcttattgagcatggattccgcctgccatcggctgccgacaaccggccactcacgttc
gaggagtttgagcgcacggtcgggcagtgtatttacgtcagtgccactccgggtccgtac
gaagaggagcatcagcagcgaatcgtcgagcagatcattcgacccacgggactcctggat
ccgacgatcacggtccggcccatcaaaggccaaattgacgatctcgtcggtgaaatccgc
gaacgcattcgccgcagtgaacgcgtccttgtgaccacgctgacgaaaaagatggccgag
gacttgacggattacttgaaggagatcgggatcaaggttcgctacctgcactcggatatc
aagacgatcgagcggatggtcattctgcgcgatttgcgcaaaggtgtcttcgacgtactc
gtgggcattaacttactccgcgagggacttgacttgccggaagtgtcgctcgttgccatc
ctcgacgcggacaaggaaggtttccttcgcgcacatcgctcgctcattcagactattggt
cgcgcggctcggaatgccaacggtgccgtcatcatgtatgccgacaagattacggactcc
atgcgtatcgccatcgatgagacagagcgtcgccgggagaagcaaattgccttcaacgag
ttgcacgggattgtgccgacgaccattcacaaggcggtgcgcgacgtgatcgaatcgacg
aaggtcgcggaggaagccgaagattacgtaagcgtggccgaacaggcacaatcgcttggc
aagcgcgaacggaaagacctcattgcaaaactggaacaagaaatgcgcgaagccgcgaag
cagttgcagttcgagcgagcagctcagttgcgcgatatgatttcggagttagtggacgct
tcgtaa
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