Aeromicrobium duanguangcaii: NP095_02250
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Entry
NP095_02250 CDS
T09547
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
adb
Aeromicrobium duanguangcaii
Pathway
adb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NP095_02250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adb03021
]
NP095_02250
03400 DNA repair and recombination proteins [BR:
adb03400
]
NP095_02250
Enzymes [BR:
adb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NP095_02250
Transcription machinery [BR:
adb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NP095_02250
DNA repair and recombination proteins [BR:
adb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NP095_02250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UUI68950
LinkDB
All DBs
Position
447888..451703
Genome browser
AA seq
1271 aa
AA seq
DB search
MNFFDQIKIGLATADDIRNWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWECYCG
KYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPK
DLEKVIYFAAYMITSVDEDARHRDLDSLEAKIRQEIDQIENRKNDAINSRAVKLEEDTAA
LEAEDAKAAELRKVRDAAEREMGQLRDRHDREIARIQEVWDRFKNLKVQDLEGDELLFRE
MQYRFGKYFDGYMGAAAIQKRLQDFDLVAEAESLREIIATGKGQRKTRALKRLKVVSAFM
GSENNPAGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAP
EIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGKRVD
YSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERARPVV
WDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCSAFNADFDGDQMAV
HLPLSAEAQAEARVLMLSTNNILKPSDGRPVTMPTQDMIIGLYFLTLDRDGHVGEGRAFS
STSEATMAFERGEITLQSKVKIRIDGEIRETTLGRAIFNETLPADYPFVNFQVGKKELGV
IVNDLAERYSKVDVAVALDNLKDAGFHWATRSGVTISMDDVVSPQDKVEILEKYEGQAAK
VQQQFDRGLITEDERRQELIEIWTQATAEVASTMEELFKASGDNPIWMMVNSGARGNMMQ
LRQIAAMRGLVANPKGEIIPRPIKANYREGLSVVEYFIATHGARKGLADTALRTADSGYL
TRRLVDVSQDVIIREEDCGTERGLPKTIATRLDDGTLVAAENVETSAYARNAAVDIVHPE
TGEVLVGAGEDLGDVEIHHLIASGVESIKVRTVLTCDAKTGTCAKCYGRSLATGKLVDIG
EAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITHGLPRVVELFEARQPKGKAPITEAAG
RVTIDDSDKGRKLVVTPDNGGEPVEYPVTKRARLLIQDNDTVEVGQQLTHGTPDPQEVLR
ILGVRRAQEHLVDEVQEVYRSQGVAIHDKHIEIIVRQMLRRVTVIEQGDARLIPGDLADR
AVFEEENRRVVAEGGTPASGRPVLMGITKASLAVESWLSAASFQETTRVLTEAAIQGKSD
SLRGLKENIIIGKLIPAGTGLERYRNIRVEPTEEARQNAYAVTGYDSFDYQFGASDAAPV
ALDDYDFSFDN
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttcttcgatcagatcaagatcggtctcgcgaccgccgacgacattcgcaattgg
tcgttcggtgaggtcaagaagccggagacgatcaactaccgcacgctcaagcccgagcgt
gacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgctactgcggc
aagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtcgaggtgacg
cgctcgaaggtccgccgtgagcggatgggccacatcgagctcgccgccccggtcacgcac
atctggtacttcaagggtgtgcccagccgtctgggctacctgctggatctggctccgaag
gacctcgagaaggtcatctacttcgcggcctacatgatcacctcggtcgacgaggacgcg
cgtcatcgtgacctcgacagcctcgaggccaagatccgccaggagatcgaccagatcgag
aaccgcaagaacgacgcgatcaactcccgagccgtcaagctcgaggaggacaccgcggcg
ctcgaggccgaggacgccaaggcggccgagctgcgcaaggtccgcgatgcggccgagcgt
gagatgggtcagctgcgcgatcgtcacgaccgtgagatcgcccgcatccaggaggtctgg
gaccggttcaagaacctcaaggtccaggacctcgagggtgacgagctgctgttccgcgag
atgcagtaccgcttcggcaagtacttcgacggctacatgggcgctgcggcgatccagaag
cgcctgcaggacttcgacctcgtggccgaggccgagtcgctgcgcgagatcatcgcgacc
ggcaagggccagcgcaagacgcgtgccctgaagcggctcaaggtcgtctcggcgttcatg
ggcagcgagaacaacccggccggcatggtcctggacgccgtcccggtcatcccgccggag
ctgcgcccgatggtccagctcgacggtggccgtttcgccacctccgacctgaacgacctg
taccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgctcgacctcggcgcgccc
gagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgactcgctgttcgac
aacggccgccgtggtcgtcccgtcacgggtccgggcaaccgtcccctgaagtcgatctcg
gacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaagcgcgtcgac
tactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccagtgcggtctg
cccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgcctggtcgacctg
aaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtgctcgtccggtcgtg
tgggatgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgcgcgcccacg
ctgcaccgtctgggcatccaggcgttcgagccccagctgatcgagggcaaggccatccag
atccacccgctcgtctgctcggccttcaacgccgacttcgatggtgaccagatggccgtg
cacctgccgctgtcggccgaggctcaggccgaggcccgcgtcctgatgctctcgacgaac
aacatcctgaagccgtcggacggccgaccggtcaccatgcccacccaggacatgatcatc
ggtctgtacttcctcacgctcgaccgtgacggtcacgtgggcgagggtcgtgccttcagc
tcgacctccgaggcgacgatggcgttcgagcgtggcgagatcacgctgcagagcaaggtc
aagatccgcatcgacggcgagatccgcgagaccacgctcggccgggcgatcttcaacgag
acgctgcccgcggactacccgttcgtgaacttccaggtcggcaagaaggagctcggcgtc
atcgtcaacgacctcgccgagcgctacagcaaggtcgacgtggcggtggcgctggacaac
ctgaaggacgccggcttccactgggcgacccgctcgggtgtcaccatctcgatggatgac
gtcgtcagcccgcaggacaaggtcgagatcctcgagaagtacgagggtcaggccgccaag
gtccagcagcagttcgaccgcggtctcatcaccgaggacgagcgtcgtcaggagctcatc
gagatctggacccaggccacggccgaggtcgcctcgacgatggaggagctgttcaaggcc
agcggggacaacccgatctggatgatggtcaactccggtgctcgcggcaacatgatgcag
ctgcgtcagatcgccgccatgcgaggcctggtggcgaacccgaagggcgagatcatcccg
cgcccgatcaaggcgaactaccgcgagggcctgtcggtcgtcgagtacttcatcgcgacc
cacggtgctcgtaagggcctggccgacaccgcgctgcgtacggccgactcgggttacctg
acccgtcgtctggtcgacgtcagccaggacgtcatcatccgcgaggaggactgcggcacc
gagcgtggtctgcccaagacgatcgcgacgcgactcgacgacggcacgctcgtcgccgcc
gagaacgtcgagacgtcggcctacgcccgcaacgcggcggtcgacatcgtccacccggag
accggcgaggtgctggtcggtgcaggtgaggacctcggcgacgtcgagatccaccacctc
atcgcctcgggcgtcgagtcgatcaaggtgcgcacggtcctgacctgcgatgccaagacc
ggcacgtgcgccaagtgctacggccgttcgctggccaccggcaagctcgtcgacatcggc
gaggccgtcggtaccatcgcggcccagtcgatcggtgagcccggcacccagctgacgatg
cgtaccttccacaccggtggtgtggccggtgacgacatcacccacggtctgccgcgcgtc
gtcgagctcttcgaggcccgtcagcccaagggcaaggcgccgatcaccgaggccgccggt
cgtgtcacgatcgacgactcggacaagggccgcaagctggtcgtcacgccggacaacggt
ggcgagccggtcgagtacccggtcaccaagcgtgcgcgcctgctgatccaggacaacgac
acggtcgaggtcggtcagcagctgacgcacggtactccggatccgcaggaggttctgcgc
atcctgggtgtccgccgggctcaggagcacctggtcgacgaggtccaggaggtctaccgc
agccagggcgtggcgatccacgacaagcacatcgagatcatcgttcgccagatgctccgt
cgcgtgacggtcatcgagcagggcgacgcgcgactgatccccggcgacctcgcggaccgc
gcggtcttcgaggaggagaaccgccgcgtggtggccgagggcggcacccctgcctccggt
cgtccggtcctgatgggcatcacgaaggcctcgctggccgtcgagtcctggctgtcggcc
gcctccttccaggagacgacccgcgtcctcaccgaggccgcgatccagggcaagtcggac
tcgctgcgcggtctgaaggagaacatcatcatcggcaagctgatcccggccggcaccggc
ctggagcggtaccgcaacatccgggtcgagccgaccgaggaggcgcgtcagaacgcctac
gcggtcaccggctacgacagcttcgactaccagttcggagcatcggacgcggcgccggtg
gcgttggacgactacgacttcagcttcgacaactga
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