Aeromicrobium duanguangcaii: NP095_05370
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Entry
NP095_05370 CDS
T09547
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
adb
Aeromicrobium duanguangcaii
Pathway
adb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP095_05370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adb03019
]
NP095_05370
03400 DNA repair and recombination proteins [BR:
adb03400
]
NP095_05370
Enzymes [BR:
adb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP095_05370
Messenger RNA biogenesis [BR:
adb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NP095_05370
DNA repair and recombination proteins [BR:
adb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NP095_05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
B12-binding
MGS
Motif
Other DBs
NCBI-ProteinID:
UUI69528
LinkDB
All DBs
Position
1043046..1045151
Genome browser
AA seq
701 aa
AA seq
DB search
MTSIATTTADAALERLRALTGRPDAQFHEGQLEAIAALVDDQRRALVVQRTGWGKSAVYF
VATALLRARGAGPTVLVSPLLALMRDQVAAAERAGVRAAAINSATVEEWDDIEARLAADT
IDVLLVSPERLNNPTFRERQLPRLLEQMGLLVVDEAHCISDWGHDFRPDYRRLAHVIESL
GPHVPVLATTATANARVVADVAEQLGGDVLTLRGSLARDSLRLGCLTLPTAKQRLGWLVA
HLGDLDGSGIIYALTVSAAEDTARLLREAGFEVRAYTGRTDPSEREELEQALKENRVKAL
VATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRATERADVLLLPGPEDRDIWRY
FATASMPDPERAARVIDQLGSEPISTPALEALVDVKRTQLELLLKVLDVDGAVRKVRGGW
VATGRPWTYDAERYERIAAAREHEQQAMLTYERGETCRMQLLQQDLDDPSAAPCGRCDVC
AAPFYPTDVPEATVGRATEALDRVGVPIEPRGQWPTGADRRGVDVKGRIAPDERAETGRV
VARLTDLGWGGTLRELFAAGAPDREIPEPLVGAVVRALRDWPWDQRPVAVVAMPSVTRPT
LVRSTAETISRLGRMPLLGTLDLDPHIPRAETGGNSAFRLASVWGRFSVGPELAAALAGL
NGPVLLVDDLVDSRWTITVAARELRRAGAPGVLPFALASVG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatcgccaccaccaccgccgatgccgccctcgaacgactccgggcgctgacg
ggacgacccgacgcccagttccacgagggccagctcgaggcgatcgcggcgctggtcgac
gaccagcgccgtgcgctcgtcgtccagcgcaccggctggggcaagtccgcggtgtacttc
gtggccaccgcgctgctgcgtgctcgcggtgccggcccgacggtcctggtgtctcccttg
ctggccctgatgcgcgaccaggtcgccgccgccgagcgcgccggcgtgcgggccgccgcc
atcaactcggccacggtcgaggagtgggacgacatcgaggcccggctggccgccgacacg
atcgacgtgctgctggtctcacccgagcggctcaacaacccgacgttccgcgagcggcag
ctgccgcgactgctcgagcagatgggcctgctcgtcgtcgacgaggcgcactgcatctcc
gactggggccacgacttccggcccgactaccgccggctggcccacgtcatcgagtcgctg
gggccgcacgtgccggtcctggcgaccaccgccacggccaacgcccgcgtcgtggccgac
gtggccgagcagctcggcggcgacgtcctgaccctgcgcggctcgctggcacgtgactcg
ctgcggctgggttgcctgacgctgcccaccgccaagcagcggctgggctggctcgtcgct
cacctgggtgacctcgacggcagcgggatcatctacgcgctcaccgtctcggcggccgag
gacacggcgcggctgctgcgcgaggcgggcttcgaggtgcgggcgtacaccggccgcacg
gacccttccgagcgcgaggagctggagcaggcgctgaaggagaaccgagtcaaggcgctc
gtcgccacgagcgccctggggatgggcttcgacaagcccgacctggggttcgtgatccac
ctcggtgcgccgtcgtcgcccgtggcctattaccaacaggtgggccgtgccggccgcgcc
accgagcgcgccgacgtgctgctgctgcccgggccggaggatcgcgacatctggcggtac
ttcgccacggcgtcgatgcccgatcccgagcgcgcggctcgcgtcatcgaccagctgggc
tccgagccgatctccaccccggccctcgaggcgctcgtcgacgtcaagcgcacccagctg
gagctgctgctcaaggtgctcgacgtcgacggcgccgtccgcaaggtgcgcgggggatgg
gtcgccaccggccggccctggacgtacgacgccgagaggtacgagcgcatcgcggcggcc
cgtgagcacgaacagcaggcgatgctgacgtacgagcggggcgagacgtgccggatgcag
ttgctgcaacaggacctcgacgacccctcggccgcgccctgcggccggtgcgacgtctgc
gcggcgccgttctatccgacggacgtccccgaggccaccgtcggccgtgccaccgaggca
ctcgaccgggtcggcgtgccgatcgagccccggggccagtggcccacgggtgccgatcgc
cgcggcgtcgacgtcaagggccggatcgcgccggacgagcgcgccgagaccgggcgcgtg
gtcgcccgactgaccgacttgggctggggcggcacgttgcgagagctgttcgccgcaggg
gcgcccgaccgcgagatccccgagccgttggtcggcgccgtcgtgcgggcgctgcgggac
tggccgtgggaccagcgacccgtcgcggtcgtggcgatgccctcggtcacgcgaccgacc
ctggtgcgctccacggccgagacgatctcgcgactgggccggatgccgctgctcggcacg
ctcgacctcgacccgcacatcccgcgcgccgagaccggcggcaacagcgccttccgtctc
gcctcggtgtggggacggttctcggtcggtcccgagctggctgccgcgttggctggtctg
aacgggccggttctgctggtcgacgacctggtcgacagccggtggacgatcaccgtcgcg
gcccgcgagctgcgccgagccggcgcgcccggcgtcctgcccttcgcgctggccagtgtc
ggctga
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