Aeromicrobium duanguangcaii: NP095_06095
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Entry
NP095_06095 CDS
T09547
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
adb
Aeromicrobium duanguangcaii
Pathway
adb03030
DNA replication
adb03430
Mismatch repair
adb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP095_06095 (dnaE)
03430 Mismatch repair
NP095_06095 (dnaE)
03440 Homologous recombination
NP095_06095 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adb03032
]
NP095_06095 (dnaE)
03400 DNA repair and recombination proteins [BR:
adb03400
]
NP095_06095 (dnaE)
Enzymes [BR:
adb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP095_06095 (dnaE)
DNA replication proteins [BR:
adb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NP095_06095 (dnaE)
DNA repair and recombination proteins [BR:
adb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NP095_06095 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UUI69662
LinkDB
All DBs
Position
1201309..1204848
Genome browser
AA seq
1179 aa
AA seq
DB search
MASDSSFVHLHVHTEYSMLDGHSLLGGLFERTAEQQMPAIAMTDHGNVHGAFDFWKTAKK
HGIKPIIGLEAYLTPGTHRTEKKRVRWGRGNAAEEGGDDVAGGGAYTHMTMWASSTEGMH
NLFRLSSLSSLEGYYYKPRADRELLEKYSTGLIATTGCPSGAVQTRLRLGQYEEARREAA
ELQEILGKENLFLELMDHDISVERRVREDLLRLGRELGIPPVATNDSHYTHPQDAAAHDA
LICVASGKRISDEKRLRFDGGGYYIKSAAEMRSLWEDKHGMKEACDNTLLIAERCEVEFT
ESTGGYMARADIPAGETEESWFRQEVWRGIESRYGADFGDDVRARTEMELDIIAQKGYCG
YYLVVADFIGWSKDNGIRVGPGRGSGAGSIAAYALRITDLCPLKNGLIFERFLNPERPSM
PDFDIDFDERRRGEVIQYVSQKYGTDKVAQIATFGRLKSKAAIKDASRILDYPFAMGDKI
TKAMPADVMGKGVKLGEIFDESHPRYNDGKDFRDLHSQDPDVRKVYDIALGLEGQIRNWG
VHAAGVIMSSDPLLDIVPIMKREADGSVITQFDYPMCESLGLVKMDFLGLRNLTVLNDAI
ENIKANRDIDLVLEDLEFDDREAYALLCRGDTLGVFQLDSPPIRQLLKQMQPDNFEDISA
VIALYRPGPMGADSHTNYAKRKNGRQEIDYIHPELTEALKPILGTTYGLIVYQEQVMEIA
QVLAGYSLGQADNLRRAMGKKKREVLQQEFVGFEAGMIERGFSKDAVKTLWEILVPFADY
AFNKAHSASYGVISYWTAYLKARYPAEYMAALLTSVKDDKDKSALYLAECRRLGIKVLPP
DVNDSVANFASVGPDIRFGLTAVRNVGANVVAGIVEARETKGAFTDFADFLDKVPTQVCN
KRVLDSLIKAGAFDSLGHVRRALASIAEEAVDQYIDIKRNAAIGQDSLFGAFEEEFDGLG
ITVPDIADWEKTQKLAFERDMLGLYVSDHPLGGLEHVLAANSDTSIGTLLDGDRPDGDVL
KLCGLVTNVQRRMSKKGDTWATITLEDLEGSVDIAVFPAAYNLAASVLTQDSLVVAKVRV
RRNDEGMDLSANEVTRPNIGAGRTDQPLVVSLATSRCTLDTINAFKQVLGAHPGVTEVHL
RLSGNGKTTTMRLDQGLRVSTTSSLFADLKELLGPGCLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgattcgagcttcgtgcacctgcacgtccacacggagtactcgatgctcgac
ggacactcgttgctcggcggtctcttcgagcgcaccgccgagcagcagatgccggcgatc
gcgatgaccgaccacggcaacgtgcacggtgcgttcgacttctggaagaccgccaagaag
cacgggatcaagccgatcatcggcctcgaggcctacctcacgcccggcacgcaccgcacc
gagaagaagcgcgtgcgctggggtcgcggcaacgccgcggaggagggcggcgacgacgtc
gccggcggcggcgcgtacacccacatgaccatgtgggcgtcctccaccgaggggatgcac
aacctcttccggctgtcgtcgctgtcgagcctcgagggctactactacaagccgcgcgcc
gaccgtgagctgctcgagaagtactcgaccgggctcatcgccaccaccggctgcccgtcc
ggcgccgtccagacccggctgcgcctgggccagtacgaggaggcccgtcgtgaggccgcc
gagctgcaggagatcctcggtaaggagaacctcttcctcgagctgatggaccacgacatc
agcgtcgagcgccgggtccgcgaggacctgctgcgcctgggccgcgagctgggcatcccg
cccgtggccaccaacgactcccactacacgcacccgcaggacgcggcggcgcacgacgcg
ctgatctgtgtcgcctcgggcaagcgcatcagcgacgagaagcggctgcgcttcgacggc
ggcggctactacatcaagtccgcggccgagatgcgctcgctgtgggaggacaagcacggc
atgaaggaggcgtgtgacaacacgctgctgatcgccgagcgctgcgaggtcgagttcacc
gagtccacgggcggctacatggcccgcgccgacatccccgccggcgagaccgaggagtcc
tggttccgccaggaggtctggcgcgggatcgagtcgcgctacggcgccgacttcggcgac
gacgtgcgcgcccgcaccgagatggagctcgacatcatcgcccagaagggctactgcggg
tactacctcgtggtcgccgacttcatcggctggtccaaggacaacggcatccgcgtcgga
cccggccgtggctcgggcgccggctcgatcgccgcgtacgcgctgcggatcaccgacctg
tgcccgctgaagaacggcctgatcttcgagcgcttcctcaaccccgagcgcccctcgatg
cccgacttcgacatcgacttcgacgagcgtcgccgcggcgaggtcatccagtacgtcagc
cagaagtacggcaccgacaaggtcgcccagatcgccacgttcggccggctcaagtcgaag
gccgcgatcaaggacgccagccgcatcctggactacccgttcgcgatgggcgacaagatc
accaaggcgatgcccgccgacgtcatgggcaagggcgtcaagctcggcgagatcttcgac
gagtcccacccgcgctacaacgacggcaaggacttccgcgacctgcactcgcaggacccc
gacgtccgcaaggtctacgacatcgcgctcggcctcgagggtcagatccgcaactggggc
gtgcacgccgccggcgtgatcatgagcagcgacccgctgctggacatcgtgccgatcatg
aagcgcgaggccgacggctcggtcatcacccagttcgactaccccatgtgcgagtcgctg
ggcctggtcaagatggacttcctgggcctgcgcaacctcacggtcctcaacgacgccatc
gagaacatcaaggccaaccgcgacatcgacctggtgctggaggacctggagttcgacgac
cgcgaggcctacgccctgctgtgccgcggcgacacgctgggcgtcttccagctggactcg
cccccgatccgtcagctgctcaagcagatgcagcccgacaacttcgaggacatcagcgcc
gtcatcgcgctctaccgtcccggaccgatgggcgcggacagccacacgaactacgccaag
cgcaagaacggtcgccaggagatcgactacatccatcctgagctgaccgaggcgctcaag
ccgatcctgggcacgacctacgggttgatcgtgtaccaggagcaggtcatggagatcgcc
caggtgctggccggctactcgctcggacaggccgacaacctccgtcgcgccatgggcaag
aagaagcgcgaggtcctccagcaggagttcgtcggcttcgaggccggcatgatcgagcgc
ggcttctccaaggacgccgtcaagacgctgtgggagatcctggtcccgttcgccgactac
gccttcaacaaggcgcactcggcgtcgtacggcgtcatcagctactggaccgcctacctc
aaggcccgctacccggccgagtacatggcggcgctgctcaccagcgtcaaggacgacaag
gacaagtccgcgctgtacctggccgagtgccgccggctcggaatcaaggtgctgccgccg
gacgtcaacgactcggtcgcgaacttcgcctcggtcggccccgacatccgcttcggactg
accgccgtgcgcaacgtcggcgccaacgtggtggccggcatcgtcgaggcccgcgagacc
aagggcgccttcaccgacttcgccgacttcctcgacaaggtcccgacccaggtgtgcaac
aagcgcgtcctggactcgctgatcaaggccggcgcgttcgactcgctcggccacgtccgg
cgggcactggcctcgatcgccgaggaggcggtcgaccagtacatcgacatcaagcgcaac
gccgcgatcgggcaggactcgctcttcggcgcgttcgaggaggagttcgacggcctgggc
atcacggtcccggacatcgccgactgggagaagacccagaagctcgccttcgagcgcgac
atgctgggcctgtacgtgtcggaccacccgctgggcggcctcgagcacgtcctggcggcc
aactccgacacgtccatcggcacgctgctcgacggtgatcgtccggacggcgacgtgttg
aagctgtgcggcctcgtcaccaacgtccagcgccggatgagcaagaagggcgacacctgg
gccacgatcaccctcgaggacctcgagggctcggtcgacatcgccgtcttcccggccgcc
tacaacctggcggcatcggtcctgacgcaggactcgctcgtggtcgcgaaggtgcgcgtt
cggcgcaacgatgagggcatggacctgtcggccaacgaggtcacccggccgaacatcggc
gcaggacgcaccgaccagccgctggtcgtcagcctggccacctcgcgctgcacgctcgac
acgatcaacgccttcaagcaggtcctgggcgcccaccccggcgtgaccgaggtccatctg
cgactctcgggcaacggcaagacgaccacgatgcggctcgaccagggcctgcgggtctcg
acgacgtcctcgttgttcgccgacctgaaggaactgctcggtccgggatgtctcgcgtga
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