KEGG   Aeromicrobium duanguangcaii: NP095_06320
Entry
NP095_06320       CDS       T09547                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
adb  Aeromicrobium duanguangcaii
Pathway
adb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:adb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NP095_06320 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adb03400]
    NP095_06320 (recD)
Enzymes [BR:adb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NP095_06320 (recD)
DNA repair and recombination proteins [BR:adb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NP095_06320 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 Viral_helicase1 SH3_13 UvrD-helicase Helicase_RecD AAA_22 AAA_16 DUF6002 AAA AAA_28 NTPase_1 Herpes_Helicase nSTAND3 T2SSE AAA_5 AAA_29 RuvB_N TsaE NPHP3_N SLFN-g3_helicase TrwB_AAD_bind
Other DBs
NCBI-ProteinID: UUI69706
LinkDB
Position
complement(1247439..1249133)
AA seq 564 aa
MTTHATIDDFVAAEVLTTGDALVTARLGRITGETADLPLLALAFAVRAVRHGSTCFDPRH
DPEVPGLTWPDPAAWLRAVEASDLGRVLVVEHGLVYLDRYRRLEVALCDDLTARATLSAP
PLDEARLTEDLDRLFPGAEHEDQRAAAERAARVGTIVLTGGPGTGKTTTVAGVLAILQAQ
SLAMHGRSLRVALTAPTGKAAARMREAVAATASRLALTDDERTWLTGLPSSTMHRLLGWR
PDNHTRFRHDRLRRLPHDVVVVDETSMASLENVARLLEALRPDTRLILVGDADQLASVEA
GAVLHDVVAGWSDEHVVRLTRSHRFGAGIGRLAAVVRDGDADTAVELLTAGDPAIRLVQP
DQGASLVESTLMPIARDLVAAGRHDDADAALRRLGEHRLLCAHRDGPFGATTWNERVTAG
LRHDVGYGDWYPGRPVLVTRNDAQLGVFNGDAGVVVERDGQLVVAVDGEPVREFATSRLP
DVQTGYAMTIHRSQGSEFSHVTVLLPDADSRAMTRELLYTAITRAVDTVTVIGTPDDIRT
AIGRRVARSSGIAERLAARQSAAR
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgacgacgcacgccacgatcgacgacttcgtcgccgccgaggtcctgacgaccggagac
gccctggtcaccgcgcggctcggtcggatcaccggcgagacggcggacctgccactgctc
gcgctggcgttcgccgtgcgggcggtccggcacgggtcgacctgcttcgacccgcgccat
gatcccgaggtgccaggtctgacgtggcccgacccggccgcgtggctgcgcgccgtcgag
gccagcgacctcggccgggtactcgtggtcgagcacgggctcgtctacctggatcgctac
cgccggctggaggtcgcgctctgtgacgacctcacggcccgggcgacactctcggcgccc
ccgctcgacgaggcacggctcaccgaggacctcgaccggctcttccccggcgccgagcac
gaggaccagcgcgccgcggccgagcgcgcggcccgcgtcggcacgatcgtgctgaccggc
ggaccgggcaccggcaagaccacgacggtcgccggcgtcctggcgatcctgcaggcgcag
tcgctggccatgcacggccggtcgctgcgggtcgccctgaccgccccgacgggcaaggcc
gcggcccgcatgcgcgaggccgtcgcagccaccgccagccggctggcgctcaccgacgac
gagcggacgtggctcaccgggctgccgtcctcgacgatgcaccggctgctcggctggcga
ccggacaaccacacgcggttccggcacgaccgtctgcggcgcctgccccacgacgtcgtg
gtggtcgacgagacctcgatggcctccctcgagaacgtcgcccggctgctcgaggcgctg
cgccccgacacccggctcatcctggtcggcgacgccgaccagctggcctccgtcgaggcc
ggggccgtcctgcacgacgtcgtcgccgggtggtccgacgagcacgtcgtccggctcacc
cgcagccaccggttcggggcggggatcggcaggctcgccgcggtcgtgcgcgacggcgac
gccgacacggcggtcgagctgctcaccgccggcgatcccgcgatccgtctcgtgcagccc
gaccagggcgcgtcactggtcgagtcgactctcatgccgatcgcccgcgacctcgtcgcg
gccggacgccacgacgacgcggacgccgccctgcggcgcctgggcgagcaccggctgctg
tgtgcccatcgcgacggaccgttcggcgccacgacgtggaacgagcgcgtcacggccggc
ctgcgtcacgacgtcggctacggcgattggtaccccggacggcccgtcctcgtgacccgc
aacgacgctcagctgggtgtgttcaacggcgacgccggggtggtcgtcgagcgcgacggt
cagctggtggtggccgtcgacggcgagcccgtgcgcgagttcgccacctcgcggctgccc
gacgtccagaccggctacgcgatgacgatccaccgcagccagggcagcgagttctcccac
gtcaccgtgctgctgcccgatgccgactcgcgggcgatgacccgcgagctgctctacacc
gcgatcacgcgcgccgtcgacaccgtgacggtcatcggcacgcccgacgacatcaggacg
gcgatcgggcggcgagtcgcccgatccagtgggatcgcggagcgactcgccgcccgtcag
tcggcagcgcgctga

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