Aeromicrobium duanguangcaii: NP095_09600
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Entry
NP095_09600 CDS
T09547
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
adb
Aeromicrobium duanguangcaii
Pathway
adb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP095_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adb03019
]
NP095_09600
03016 Transfer RNA biogenesis [BR:
adb03016
]
NP095_09600
Enzymes [BR:
adb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NP095_09600
Messenger RNA biogenesis [BR:
adb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NP095_09600
Transfer RNA biogenesis [BR:
adb03016
]
Prokaryotic type
tRNA degradation factors
NP095_09600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
KH_2
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-ProteinID:
UUI67462
LinkDB
All DBs
Position
complement(1953751..1955970)
Genome browser
AA seq
739 aa
AA seq
DB search
MSDITTVETVLDNGRFGTRTVRFETGLLAQQAAGSVAAYLDDDTMLLSATTAGKHPKDHF
DFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPTFKKGLRNEVQVV
ITVLALNPDTPYDVLAINAASASTQISGLPFSGPIGATRVALIDGQWVAFPTHSQLEEAV
FDMVVAGRVAGDDVAIMMVEAESTENTWELVQSGVQAPTEEIVAGGLEAAKGFIRQLCEA
QAELATTAAKPVQDFPVFLDYEDDAYEAVREIASADLAGALTIVRKADREERESEIKANV
IEQLGERFEGREKELGAALRSLTKELVRERVLRDNVRIDGRGLADIRALSAEVGIIPRVH
GSALFQRGETQILGVTTLNMLDLEQKLDTLSPETTRRYMHNYNFPPFSTGETGRVGSPKR
REIGHGALAGRALLPVLPSRAEFPYAIRQVSEALSSNGSTSMGSVCASTLGLLNAGVPLR
APVAGIAMGLISGVVDGEQKFVTLTDILGAEDAYGDMDFKVAGTRDFVTALQLDTKLNGI
PADVLAGALQQAHDARQTILDVMAEAISEPDEMSPYAPRIITVKIPVDKIGELIGPKGKM
INQIQDDTGAKISIDDDGTVFIGAEHGDSAEAARAAVNAIANPTMPEVGERYLGTVVKTV
DFGAFISLLPGKDGLLHISKLRELNGGQRVNNVDDVVKVGDKIQVEIAELGDRGKLSLIP
VVEKTEDAAVETAEESTEA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatcaccaccgtagagaccgtcctcgacaacggccgtttcggcacccgcacg
gtgcgtttcgagaccggcctgctggcccagcaggccgccggctccgtcgccgcctacctc
gacgacgacaccatgctgctctcggccaccacggccggcaagcaccccaaggaccacttc
gacttcttcccgctgacggtcgacgtcgaggagcgcatgtacgccgcgggtcgcatcccg
gggtcgttcttccgtcgtgagggccgtcccagcgaggacgccatcctcacctgccgcctg
atcgaccgcccgctgcgcccgaccttcaagaagggtctgcgcaacgaggtccaggtcgtc
atcacggtcctggcgctcaaccccgacaccccgtacgacgtgctggcgatcaacgccgcc
tcggcgtccacgcagatctcgggcctgccgttcagcggccccatcggcgccacccgcgtc
gcgctcatcgacggccagtgggtcgcgttcccgacgcacagccagctcgaggaggccgtg
ttcgacatggtcgtcgcgggccgggtcgccggtgacgacgtcgcgatcatgatggtcgag
gccgagtccaccgagaacacctgggagctcgtccagagcggcgtccaggcgcccaccgag
gagatcgtcgccggtggcctcgaggccgccaagggcttcatccgccagctgtgcgaggcc
caggccgagctggccacgacggccgccaagcccgtccaggacttcccggtcttcctcgac
tacgaggacgacgcctacgaggccgtccgcgagatcgcctcggccgacctggccggcgcg
ctcacgatcgtccgcaaggccgaccgcgaggagcgcgagtccgagatcaaggccaacgtc
atcgagcagctcggtgagcgcttcgagggccgcgagaaggagctcggcgccgcgctgcgc
tcgctgaccaaggagctcgtccgcgagcgcgtcctgcgcgacaacgtccgcatcgacggc
cgtggtctggccgacatccgcgccctgtccgccgaggtcggcatcattccgcgcgtccac
ggctcggcgctgttccagcgtggcgagacccagatcctgggtgtcacgacgctgaacatg
ctcgacctggagcagaagctcgacacgctctcgcccgagaccacgcgtcggtacatgcac
aactacaacttcccgccgttctccaccggtgagaccggacgcgtgggctcgcccaagcgt
cgcgagatcggtcacggcgccctggccggccgggcgctgctgcccgtgctgccctcgcgt
gcggagttcccgtacgcgatccgccaggtgtccgaggcgctgagctccaacggctcgacg
tcgatgggctcggtctgcgcctcgaccctgggcctgctgaacgccggtgtgccgctgcgc
gccccggtcgccggcatcgcgatgggtctcatctccggtgtggtcgacggcgagcagaag
ttcgtcacgctgaccgacatcctcggagccgaggacgcctacggcgacatggacttcaag
gtcgccggaacgcgtgacttcgtcaccgccctgcagctggacaccaagctcaacggcatc
cccgccgacgtgctggccggtgccctgcagcaggcgcacgacgcccgtcagacgatcctg
gacgtgatggccgaggccatcagcgagcccgacgagatgagcccctacgctccgcggatc
atcacggtgaagatcccggtcgacaagatcggcgagctcatcggcccgaagggcaagatg
atcaaccagatccaggacgacaccggcgcgaagatctcgatcgacgacgacggcaccgtc
ttcatcggtgccgagcacggcgactcggccgaggccgcgcgggcggcggtcaacgcgatc
gccaacccgacgatgcccgaggtcggcgagcgctacctgggcaccgtcgtcaagacggtc
gacttcggcgcgttcatctcgctgctgccgggcaaggacggcctgctgcacatcagcaag
ctgcgcgagctcaacggtggccagcgcgtcaacaacgtcgatgacgtcgtcaaggtcggt
gacaagatccaggtcgagatcgccgagctcggcgaccgcggcaagctgtcgctgatcccg
gtcgtcgagaagaccgaggacgcggccgtcgagacggccgaggagtccaccgaggcctga
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