KEGG   Aeromicrobium duanguangcaii: NP095_11985
Entry
NP095_11985       CDS       T09547                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
adb  Aeromicrobium duanguangcaii
Brite
KEGG Orthology (KO) [BR:adb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adb03400]
    NP095_11985
Enzymes [BR:adb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NP095_11985
    5.6.2.6  RNA 3'-5' helicase
     NP095_11985
DNA repair and recombination proteins [BR:adb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NP095_11985
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr DEAD Helicase_C ResIII PhoH AAA_25
Other DBs
NCBI-ProteinID: UUI67915
UniProt: A0ABY5KFT5
LinkDB
Position
2414414..2418943
AA seq 1509 aa
MGFGEATTTWFDESFAGPTPAQTGAWQAIERGRHTLVVAPTGSGKTLAAFLSAIDGLLHR
DRDVEPEGTSVLYISPLKALAVDVERNLRSPLVGISGVAARLGQELAPVTVGVRTGDTPP
TERRRLQSHPPDVLITTPESLFLVLTSASREMLRGVHTVIVDEVHAVAGTKRGAHLAVSL
ERLDDLLEKPAQRIGLSATVSPHDEVARFLGGRAPVEVVAPEAPSRLELSVRVPVEDLTE
MPPRHGGPREGSAARGLDEPKDAGGTIWPHVEEAIVDAISAARTTIVFANSRGVAERLTQ
RLNEVWVERETGQRPEPATRQPAHMGGLSGISLGTEPVLARAHHGSVSKEQRALIEDDLK
SGRLRCVVATSSLELGIDMGAVDLVIQVSAPPSVASGLQRVGRAGHQVGEVSRGLVFPTG
RHDLLSTTVTVERMLAGRIERLSVPANPLDVLAQQTVAACALEPIDVEAWFETLRRSAPF
ATLPHAAYEATLDLVAGRYPSDEFAELRPRAVWDRVAGTLTGRPGAQRLAVTSGGTIPDR
GMFSVVLAGEEGTAGRRVGELDEEMVYESRINDVIALGATSWRIMEITSDRVIVVPAFGL
PARLPFWRGDAVGRPYELGEAMGAFLRELSALSPAKQRARVEEVGLDAYAVANLAALITD
QVEATRQLPTDTTLVVERFRDEVGDWRLVLLSPYGRAVHAPWALVVGRRIEQRFGVDGAV
VASDDGIVARVPDVTGEPPGADLFDLEDPEDLESQVTELVGGSALFAARFRECAARALLL
PRRNPGARAPLWQQRRRAAMLLDVTRKYPDFPILLETAREVLQDVYDLPALMTLARRLRS
REVALVEVGTDNASPFAQRLLFGYVGAFLYDSDLPLAERRAAALTLDPELLGQLLGRADL
RELLDPEVVQQTEAELQRLVPERQAKNLEGVADLLRLLGPLTSDEVAERTLPDARLETGA
WLKELRESRRVVEVQVGGQLRWAAVEDAGRLREALGTALPLGIAEAHLAPGPDPLGELVA
RFARTHGPFTTESVAARLALGPAVVRDALQRLSDVGRVTRGEFLPVASGDTEWVDSEVLR
RLRNRSLAAARQQVEPVDAAAFARFLPSWQHVGSRLRGPDGVLTVVEQLAGAALPASAWE
SLVLPSRVSDYSPAMLDELTTAGEVTWTGAGTLPGRDGWVRLLPGDTPGLPTGDLVEAGA
DSTAGRLLEVLGDSGAWLFSELASRIVGTEREGLVEALWELVWSGQVSNDTFAPVRSLVA
GGGAHRTRRQAPRARMIGGRMRAPRAVVPPIASGRWFSVPLGGQTTAEHIARAETLLNRY
GVVTRGSVQAEQTPGGFAATYRVLREMEQNGSALRGYFVDSLGAAQFAAPGVVDRLRSFV
RDDDEPADSPAVTLAATDPANPFGAALPWPGRGADGHRPARKAGSLVVIHDGRAVLYLER
GGKSALTFTDQPAALTAAAESLVQTVRRGRLGRLTVQTADGEPVASTPLGQALAAAGFEA
HLKGLRLDA
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgggtttcggcgaggcgaccaccacgtggttcgacgagtcgttcgccgggcccactccc
gcccagacgggcgcctggcaggcgatcgagcggggtcggcacacgctcgtcgtcgcaccg
accggctcgggcaagacgctcgccgcgttcctgtcggcgatcgacggactgctgcaccgt
gatcgcgacgtcgagcccgagggcacgtcggtgctctacatctcgccgctcaaggcgctg
gcggtcgacgtcgagcgcaacctgcggtcgcccctcgtgggaatctcgggggtcgccgcg
cggctgggccaggagctggctcccgtcaccgtgggcgttcgcacgggcgacactcccccg
accgagcggcgccggctgcagtcgcatccgcccgacgtcctgatcaccacgcccgagtcg
ctgttcctcgtgctcacctcggcctcgcgcgagatgctgcgcggggtccacaccgtcatc
gtcgacgaggtccacgccgtggccggcaccaagcgtggcgcccaccttgcggtctcgctc
gagcggctcgacgacctcctcgagaagccggcccagcggatcggcctgtcggccaccgtc
agtccccacgacgaggtcgcgcgattcttgggcggccgcgctcccgtcgaggtcgtggcc
cccgaggctccgtcgaggctcgagctgtcggtgcgggttccggtcgaggacctcaccgag
atgccgccgcgccacggggggccgcgcgagggcagcgccgcccgcggcctcgacgagccg
aaggacgccggtggcacgatctggccgcacgtcgaggaggcgatcgtcgacgcgatatcg
gcggcgcgcaccaccatcgtcttcgccaacagccgcggcgtggccgagcgattgactcag
cggctcaacgaggtctgggtcgagcgcgagaccggccaacggcccgagcccgccacccgg
cagccggcgcacatgggcgggctctccgggatctccctgggcaccgagcccgtgctggcg
cgggcccaccacggctcggtcagcaaggaacagcgcgccctcatcgaggacgacctcaag
tccggccggctgcgctgcgtcgtggccacgtccagcctcgagctgggcatcgacatgggc
gcggtcgacctggtcatccaggtgtccgcgccgccctcggtggcctcgggtctccagcgg
gtgggccgcgccggccaccaggtcggtgaggtctcccgcgggctggtcttccccaccggc
cgccatgacctgctctccaccaccgtcacggtcgagcggatgctggccggccggatcgag
cgcctgtccgtgcccgcgaacccgctcgacgtgctggcccagcagaccgtcgccgcgtgc
gcgctcgagccgatcgacgtcgaggcctggttcgagaccctgcggcgctcggcgcccttc
gcgaccctgccgcacgccgcctacgaggcgaccctcgacctcgtcgccgggcgctatccc
tccgacgagttcgccgagctgcggccgcgcgccgtgtgggaccgcgtggccggcacgctg
acgggtcgccccggcgcccagcgactggccgtcaccagcggcggcacgatccccgaccgc
ggcatgttctcggtcgtcctggccggcgaggagggcaccgccgggcggcgcgtcggcgag
ctcgacgaggagatggtctacgagtcgcgcatcaacgacgtgatcgccctgggcgccacc
agctggcgaatcatggagatcacctccgaccgcgtcatcgtcgtgcccgcgttcggactg
cccgcgcgcctgccgttctggcgcggcgacgcggtcgggcgcccctacgagctgggcgag
gcgatgggcgcgttcctgcgcgagctcagcgcgctgtcgccggcgaagcagcgggcgcgg
gtcgaggaggtcgggctcgacgcctacgccgtcgccaacctcgccgccctcatcaccgac
caggtcgaggcgacccgccagctgccgaccgacaccaccttggtcgtcgagcggttccgc
gacgaggtcggcgactggcggctggtgctgctgtccccctacggccgggccgtgcacgct
ccgtgggccctcgtcgtcgggcgacggatcgagcagcggttcggcgtcgacggggcggtc
gtggcctccgacgacggcatcgtcgcccgggtgccggacgtcaccggtgagccgcccggc
gcggacctgttcgacctcgaggatcccgaggacctcgagtcccaggtcaccgagctggtc
ggcggatcggccctgttcgctgcgcggttccgcgagtgcgccgcccgcgccctgctcctt
ccgcgtcgcaacccgggcgcccgggccccgctgtggcagcagcgtcgtcgcgcggcgatg
ttgctcgacgtcacccgcaagtaccccgacttcccgatcctgctcgagacggcgcgcgag
gtcctgcaggacgtctacgacctgcctgccctgatgaccctggctcggcgcctgcgctcc
cgagaggtcgcgctggtcgaagtgggcaccgacaacgcctcgccgttcgcccagcgcctg
ctgttcggctacgtcggcgccttcctctacgacagtgacctgccgctggccgagcggcga
gccgcggcgctgaccctcgatcccgagctgctcgggcagctgctcggccgcgccgacctg
cgcgagctgctcgatcccgaggtggtccagcagaccgaggccgagctgcagcggctcgtt
cccgagcgccaggccaagaacctcgagggcgtcgccgacctgctgcgactgctgggtccc
ctgacctccgacgaggtcgccgagcgcacgctcccggacgcgcgactcgagaccggtgcc
tggctgaaggagctgcgggagtcgcgccgcgtggtcgaggtgcaggtcggcgggcagctg
cgctgggccgcggtcgaggacgccggtcggttgcgcgaggcactcggcacggcactcccg
ctcgggatcgccgaggcgcatctcgcacccggtcccgatcccctcggcgagctggtcgcg
cgcttcgcccgcacccatggaccgttcaccaccgagtccgtcgccgcgcggttggccctc
ggtccggccgtcgtgcgcgatgccctgcaacggctctccgacgtcggccgcgtcacccgc
ggcgagttcctgccggtcgcctcgggcgacaccgagtgggtcgactccgaggtcctgcgg
aggctgcggaaccgctccctggccgcggcgcgccagcaggtcgagccggtcgacgcggcg
gccttcgcccggttcctgccgtcgtggcagcacgtcggctcgcggctgcgcggacccgac
ggcgtgctgaccgtcgtcgagcagctggccggcgccgccctgcccgccagcgcgtgggag
tcgctggttctgccctcgcgcgtcagcgactactcccccgccatgctcgacgagctgacc
accgcgggcgaggtcacctggaccggcgccggcacgctgcccggacgcgacggctgggtg
cggctgctgcccggcgacaccccgggactcccgacgggcgatctcgtcgaggccggcgcc
gattcgaccgccggccgtctgctcgaggtgctcggcgactccggggcgtggctgttcagc
gagctggcctcgcggatcgtcggcaccgagcgcgaaggtctggtcgaggcgctctgggag
ctggtctggagcggccaggtcagcaacgacacgttcgctcccgtccgcagcctcgtggcc
ggaggcggtgcgcaccgcacccgccgtcaggcgccccgagcccggatgatcggcggccgg
atgcgcgcgccgcgtgccgtcgtcccgccgatcgcctcggggcgctggttctctgttcct
ctcggcggtcagaccacggccgagcacatcgctcgcgccgagacgctgctcaaccggtac
ggcgtcgtcacccgcgggtcggtccaggccgagcagactcccggcgggttcgcggcgacc
tatcgcgtcctgcgcgagatggagcagaacggctcggcactgcggggctacttcgtcgac
tcgctgggagccgcgcagttcgcagcgccgggagtcgtggatcgcctgcggtcgttcgtc
cgtgacgacgacgaaccggcggactcccccgctgtcacgctcgcggccaccgatcccgcc
aatccgttcggagcggccctgccgtggcccggtcgcggcgccgacggccaccggccggcg
cgcaaggcgggatccctcgtggtgatccacgacgggcgggcggtcctgtacctcgagcgc
ggcggcaagtcggcgctcacgttcaccgaccagcccgcggcgctcacggcggcggccgag
tccctggtccagacggtccggcgcgggcggctgggccggctcaccgtccagaccgccgac
ggtgagcccgtcgcgtcgacaccgttgggacaggccctggccgcggcggggttcgaggcc
cacctcaagggactgcggctcgatgcctga

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