Abiotrophia defectiva: FOC79_00585
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Entry
FOC79_00585 CDS
T06623
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03030
DNA replication
adc03430
Mismatch repair
adc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC79_00585 (holA)
03430 Mismatch repair
FOC79_00585 (holA)
03440 Homologous recombination
FOC79_00585 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adc03032
]
FOC79_00585 (holA)
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_00585 (holA)
Enzymes [BR:
adc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC79_00585 (holA)
DNA replication proteins [BR:
adc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC79_00585 (holA)
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC79_00585 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
HTH_37
Terminase_5
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QKH46186
LinkDB
All DBs
Position
complement(125990..127012)
Genome browser
AA seq
340 aa
AA seq
DB search
MTFQASINQIRKGQLGANYFLVGTERYLRQQLQDALIDQVDQAGSFEVSRFDLNDTELAA
ILDEADAFSFFADKRVVLIDNAQILVSSSKVKVDDQDQKRLLAYLADPNPASLLIWICDS
NQVDKRKKLTKAFQAQAKWVDVAPLDAKGMGAYLQAYLKESSLQISREGLEELRMRVNDD
LTLAMAELHKLAQYSNQGKPITLEVIKDLVPRSLETDVFSLSQAVLKRKLSQAVQIYQDL
LLAKHEPVALHALLVSQFRLLIQVKLLGHQGYQQAEIAQQLGVHPYRVKLALETVRRLDL
RQLYDFYHALAEADFQLKQGIGVKEIQFDLLVSRYMTGSP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcaagctagcatcaaccaaatccgcaagggccaattaggggccaattacttt
ctagttggtaccgagcgctatttgcggcaacagttgcaggatgccctgattgatcaagta
gatcaggcaggtagctttgaagttagtcgctttgacttgaatgacacggaattagctgcc
attctggacgaggcagatgccttctctttctttgctgataagcgtgttgtcctaatcgat
aatgctcagattctggtttcaagttctaaggttaaggtagatgatcaagatcaaaagcgt
ctccttgcttatttggcagatcctaatcctgcgagtttgctaatttggatctgtgacagt
aaccaagtcgataagcgcaagaagctgactaaggctttccaggcccaggcaaaatgggtc
gatgtggcgcctttagacgccaagggaatgggggcctatctccaagcctacctcaaggaa
agtagcctccagattagccgtgaggggctagaggagctacgtatgagggttaatgacgat
ttgaccttggctatggcagaactccataaattagcccaatacagcaatcagggaaagcca
attacgctagaggtcatcaaagacttagtacccagaagccttgagacggatgtctttagc
ttgtcacaggcagttttgaagcgaaagttgagtcaggcggtccaaatctaccaagattta
ctcctagccaaacacgagcccgtggccttgcacgcgctcttggtcagtcagtttcgtttg
ttgattcaggtcaaattgcttggccaccaaggctatcagcaagctgagatagcgcaacag
ttgggtgtccatccttatcgcgttaaattggctttagagactgtcagacgcttagattta
agacagctctatgatttctatcatgcgctggctgaggctgattttcagctcaaacaaggc
attggcgtcaaggagatacaatttgacttgttagtgagtcgttatatgaccgggagtccc
taa
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