Abiotrophia defectiva: FOC79_00685
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Entry
FOC79_00685 CDS
T06623
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
adc
Abiotrophia defectiva
Pathway
adc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC79_00685 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adc03019
]
FOC79_00685 (rny)
Messenger RNA biogenesis [BR:
adc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOC79_00685 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_KhpA-B
ArsP_1
UPF0154
KH_2
Motif
Other DBs
NCBI-ProteinID:
QKH46206
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Position
complement(143279..144841)
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AA seq
520 aa
AA seq
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MDLLQLTFAVIVALIIGVVIGYIFKKKSDEKHIGNAKANAESIVDAAIAQAKTLKREALF
EAKEENLKYRNELEQELKERRTEVTGMEKRLLQREETLDQKSLILDKRELNLESKEQDYQ
KRQKTLTQQEEKVQELVVAQQSELERVATLSRQEAQNIIMTETEQALSQEIAVMIRNAEQ
KAKDEADRNAKNIILQAIQRSAPDIVSENTVTVVHLPSDDMKGRIIGREGRNIRTLESLT
GIDLIIDDTPEAVVLSGFDPIRRQIAKLALEKLIQDGRIHPARIEEMVDRARREIDEKIR
EIGEQATFDVGIHSLHPDLIKIIGRLSFRTSYGQNVLNHSIEVAKLAGVMAGELGEDVAL
AKRAGLLHDIGKALDHEIEGSHVEIGAEIAKKYNEPEVVVNAIASHHGDTDPTSTIAILV
AAADALSAARPGARSESLESYIRRLEKLEEISNSFPGVANSFAIQAGREVRVMVRPNEVN
DAGASRIARDIRNRIEAEMNYPGNIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacctattgcagctcaccttcgcagtaatcgttgctttaattatcggggtagtgatc
ggctatattttcaagaagaaaagcgatgaaaagcacatcggaaatgctaaggcaaatgca
gaatccattgttgatgcggctattgcacaggctaagaccctcaagcgggaagccttgttc
gaagccaaagaagaaaatctcaagtaccgtaatgaattagaacaagaactgaaggaacgc
cggaccgaagtaactggaatggaaaaacgtctccttcaacgggaagagaccttggaccaa
aagagtctgattttagacaaacgtgaactcaaccttgagagtaaggaacaagactatcaa
aaacgtcaaaagaccttgacccaacaggaagagaaggttcaagaattggtcgttgcccaa
caaagtgaattagaacgggtggcaaccctatcgcgtcaagaggcgcaaaacatcattatg
actgagacagagcaagctttgtcccaagaaattgcagtcatgattcggaatgcagagcaa
aaagctaaagatgaagctgatcgcaatgccaaaaacattatcttacaagccattcaacgg
agtgctccggacattgtatctgagaatacagtgaccgtagtacacttaccaagcgatgac
atgaaaggtcggattattgggcgtgaaggccgcaatatccgtactttggaaagcttaacc
gggattgatttaattatcgatgacacgccagaagcagtcgtattaagcggttttgatcca
attcgacgtcaaattgctaagttggccctagaaaaactgattcaggacggccggattcat
ccagcgcgtattgaagaaatggtggaccgggcgcgtcgcgagattgacgagaaaatccgt
gaaatcggggagcaagcgacctttgatgtggggattcattctctccatcctgatttaatt
aagattattggtcgtctatcctttagaactagttatgggcagaacgtcttgaaccatagt
attgaagttgccaaacttgctggcgttatggctggtgagttaggtgaagatgtggctcta
gccaaacgtgcaggtctcctgcatgatattggtaaggcgcttgaccatgagattgaaggc
tcacacgttgaaatcggggcagagattgccaagaaatataacgagccagaagtcgtagtg
aatgctattgcttcccaccatggtgatactgatccaacttcaaccattgctatcttggta
gctgcggccgacgccttatcagcagcgcgtccaggtgctcgcagtgaatccttggaaagc
tacatccgccgtctggaaaaattagaagaaatttctaatagcttcccaggcgtggctaat
agttttgctattcaagctgggcgtgaagtccgtgtcatggttcgtccaaatgaagtcaat
gacgctggcgcctcacgaatcgctcgtgatatccgcaaccggattgaagcagaaatgaac
tacccaggcaatattaaagtaaccgttattcgcgaaacgcgcgcggttgaatacgccaaa
taa
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