Abiotrophia defectiva: FOC79_00770
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Entry
FOC79_00770 CDS
T06623
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
adc
Abiotrophia defectiva
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_00770
Enzymes [BR:
adc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOC79_00770
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FOC79_00770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QKH46219
LinkDB
All DBs
Position
complement(165705..169241)
Genome browser
AA seq
1178 aa
AA seq
DB search
MLQFVLGGLDRAKKSVLLDHLLDIQAKEPEAQFFYLVPEHLKFDMESYLLAAVQDKYGSN
EAALVDIQVVSFKRLAWFLMPNSLAEEKPISSIGQIMLIKRLLARYQDQLQVFRGQVKHQ
GFAEKLAQLFDELYLGQIQPENLSQVPDLNQQEAKRLAELALLYQGFIQEIEGQVLGHYH
DLQRLDSYLKAHPLNRPTYLVVDHHYFFNGQQLQLLTTLIQQCQAVWITLPLSQQAARSK
AYDPLIEVARHTYGQMQLLAQSLHLPVAEDWTINQVQEGYQANILTLAQAFENHLRLAPQ
ELSQPLNQVKTHVIWEHDAIQTEVRHTSNKIHQLVSQEGYRYRDILVLTRDMDRYRPLVT
ALFEQNDIPYFYDHAVIMGQHPLVLWLESGLKLYRYRYQLADIFGILKSGLWLPADLRAA
MAENPQDGPVLEEEFKAQVDLLENVVLANGYVGYRFAQLSFEWRFDQADRPYVNAAGQVT
GQTYGQVVQALRESFLADFAPYQDLAQLTSFSGQKAAEWLYQWLEEVGVKDRLIARRDQA
IEKGDLALSRQYEQVWQTLTASLDEFYQLYGEAELTFSEFQELLLTGLNEATFHIIPPAL
DQVMVTSMESPQVQAYKVCFVLGADELTLPKHHQEDSLLSVANRQSLGESLLPYQQLRQS
SQHNYSLELLMTQQVLLSASDRLYLSYVAMKGQQTVKLSPYLQQLAKQFHLPIKTYTHTL
IHQNQVKLSRLEFGRYPVQMSSLLQLVHHYSQQKDRPSAAFLDFLTLMASQNPHTWVLLA
QLFQFNQLPQNLTPETALALFGQKMTASVSKLEQYYQDPYSHFLLYGLKIRPRQQLELNA
AGAGDYYHDFLDKFTQAQEARPDFETNFASIQTLMAEDLRFNIFGTNPRMHLIKRKLDQH
LRQFLNVSLAQSQALTVQPVATELVFGSKQEAGLILPLDKGSLTLRGKIDRIDADPSQNY
YQVVDYKSGKKTFNLVDFYYGLDLQVLTYLKVASQRYPHAQAVGAFYQSLAGGFVKVDGK
QMARLSQDGLDLAKNQLHPYRGLMTISGSELVAIEPGLANQSKSQIYPVQLKKDGSYYQH
VPAVNQAELSLINQHLLHLMTQAGNAIQRGDISLVPFKDERFTPSLQADYRVITGFDATV
HYGAYRHKRLSKDQVLAQIEKEASKKEDTETSEKGGQL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaatttgtccttgggggactggatcgcgccaagaaaagcgtcttgctagatcac
ttattagacattcaagccaaggagccagaggcccagttcttttatttagtacccgaacac
ttaaaatttgatatggagtcctatttgctagcggctgtccaagacaaatatggctccaat
gaggcggctctagtcgacattcaggtagtttccttcaaacgcctggcctggttcctcatg
cctaacagcctagccgaagaaaagccaatttctagtataggccagattatgctcattaaa
cgcttgctagcgcgttatcaggaccaattacaggtctttcgtggtcaggtcaagcatcag
ggctttgccgagaagttagcacagctcttcgatgaactctatctagggcaaattcagcca
gagaatctgagtcaagtgcctgacttgaaccagcaggaagccaagcgcctagctgagttg
gccttactctatcaaggcttcatccaagaaattgaagggcaagtcctaggacattatcac
gacttgcaacgtttggacagttaccttaaggcccaccccttgaaccgaccaacctatttg
gtagtggatcaccattacttctttaatggtcagcagctacaattattgaccaccttgatt
caacaatgtcaggctgtctggattaccttgcctttatcccagcaagcggctcgttctaaa
gcctatgatccactaatcgaggtagctcgccacacctatgggcaaatgcaattgttggcc
cagtcactccatttgcctgtggcagaggattggaccattaatcaggtacaggaaggctat
caagctaatatcttaacgctagctcaggccttcgaaaatcacttacggctggcccctcaa
gaactgagccagcctctcaatcaagttaagactcatgtgatttgggagcatgatgctatc
cagacggaagtccgtcatactagcaacaagattcatcagttggtgagtcaggaaggctac
cgttaccgtgatatcttagtcctcacacgggatatggaccgttatcgccccttggtgaca
gctctctttgaacagaatgacattccttatttctatgaccatgccgtaattatgggccag
catcctctggttctgtggttggaatcagggcttaaactctatcgctatcgctaccagcta
gccgacatttttggcattctcaaatcagggctctggttacccgctgacctgagggctgct
atggccgaaaatccacaggatgggccagtcctagaagaggaatttaaggctcaagtggac
ttgctcgaaaatgtggtgctggccaatggctatgtaggctatcgctttgcccaattatct
tttgaatggcgttttgaccaagcagaccgtccttatgtcaatgcagctggtcaggtgacc
ggccaaacctatggccaggtggtccaagccttgcgggagtctttcttggctgattttgcc
ccttaccaagacttagcgcagctgactagctttagtggccaaaaagcagctgaatggctc
tatcagtggttggaagaagttggcgttaaggaccgtctgattgcccggcgcgaccaagcc
atcgaaaaaggggacctggctttgtctcgccagtatgaacaggtttggcagaccttgacc
gccagcctagatgaattctatcaactttatggggaggccgagctgacctttagtgagttc
caagaactcctactaacgggtttgaatgaagccaccttccatattattccacctgcccta
gaccaagtcatggtgactagcatggaaagtcctcaggttcaagcctataaggtttgtttt
gtgctaggggcagacgagctgactctacccaagcatcatcaggaagattcgctactgagt
gtggccaaccgccaatctctgggggaaagtctcctgccataccaacaattgcgtcagtct
agccagcacaattatagtttagaactgctcatgacccagcaggtcttactcagtgctagc
gaccgactctatctctcttatgtggcgatgaagggccagcagaccgttaagttatcgcca
tatttgcagcaattggctaagcagtttcatttgccaatcaagacctatacccataccttg
attcatcagaatcaagtcaaattaagccgacttgagtttggccgttatccggtccaaatg
agttcactcttgcagctagtccatcactattcgcagcaaaaggaccgaccaagtgctgcc
tttctagactttttgaccttaatggccagccaaaatcctcatacttgggtactcttggct
cagctcttccaatttaaccaactgcctcagaatctgacaccagagacagctttggccctc
ttcggccagaagatgacggcctcggtttctaagttagagcagtattaccaggatccctat
agccatttcttgctttatgggctcaaaattcgtccccgtcagcagctggaactaaatgcc
gcaggggcaggggattattatcatgatttcctagataaatttactcaagcccaagaggct
aggcctgattttgaaactaactttgctagcattcagacccttatggcggaagacttacgc
tttaatatctttggcaccaatcctcgcatgcacttgattaagcgcaagctggatcagcat
ttgcggcaatttttaaatgtcagtctggcgcaaagtcaagccttgacggttcaacccgtt
gcgaccgagctggtctttggtagcaagcaagaagcagggttaatcctgcctttggataag
ggcagccttaccttacgaggtaagattgaccgcattgatgcggatccaagccagaattac
taccaggtagtggactacaaatccggtaagaagactttcaacctagtagacttctattat
ggtttggatttgcaggtcttaacctatctgaaagttgccagtcaacgttatcctcatgcc
caggcggtaggggccttctatcaatccttagcaggtggcttcgtcaaggtagatggtaag
cagatggctcgactgagccaagacgggctagacttggctaagaaccaacttcatccatat
agggggctgatgaccatttcgggctctgaattagtggccattgaacctggcctagccaat
cagtctaagagccagatttaccctgttcagcttaagaaagatggtagctactatcagcat
gttccggctgtcaatcaagcggaattaagcctaatcaatcagcatctactccatttgatg
acccaggcagggaatgctattcaaagaggggatatcagcttggtgccctttaaggatgaa
cgctttacacctagcctgcaagccgactatcgggttattacaggctttgatgcaaccgtg
cattatggtgcttaccgtcataaacgcctctctaaggatcaagtcctagcccaaatcgaa
aaagaagcaagtaagaaagaagacacagagacgagtgagaaaggaggccagctatga
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