Abiotrophia defectiva: FOC79_00860
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Entry
FOC79_00860 CDS
T06623
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC79_00860 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adc03019
]
FOC79_00860 (pnp)
03016 Transfer RNA biogenesis [BR:
adc03016
]
FOC79_00860 (pnp)
Enzymes [BR:
adc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FOC79_00860 (pnp)
Messenger RNA biogenesis [BR:
adc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOC79_00860 (pnp)
Transfer RNA biogenesis [BR:
adc03016
]
Prokaryotic type
tRNA degradation factors
FOC79_00860 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
SPATA25
OB_PDCD11
DUF3294
GGDEF
Lyase_catalyt
KH_2
Motif
Other DBs
NCBI-ProteinID:
QKH46236
LinkDB
All DBs
Position
complement(189865..191967)
Genome browser
AA seq
700 aa
AA seq
DB search
MSNKHVFSTTLAGRPLSVEIGELAKQANGAVLVRYGDTVVLSAAVASKKAGTGDFFPLTV
HYIEKMYAVGKVPGGFIKREGRPSEAATLTSRLIDRPLRPMFPEGVRNEIQITNTVLSVD
QDCTPEMAAMLGASLALAVSDIPFDGPVAGVNVGRVNGEIVINPTVAQAELSDIELTVAG
TATAINMVESSAKEVSEADMLEALLKGHAAIKELVAFQNEIVAQIGKEKFEFTLAEVAPE
VAAQVGERYKSRMIQAIQTQEKKAREAAVDAVMEEATEFFAAVYADRDDYDQLMKDVSTA
LHDLEKDEVRRLITKERVRPDGRRIDEIRPLSSSVALLPRVHGSGLFTRGQTQVLTAATL
APLGEHQVIDGLGIEEGKRFIHHYNFPNFSVGETGRVGSPGRREIGHGALGERALKQVIP
APEDFPYTIRLVSEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVMEGEDYT
VLTDIQGLEDHLGDMDFKVAGTAAGITALQMDIKIQGITEAILTEALTQAKKARLEILDE
LVSTLPEARKELSPYAPKIDIIQINPDKIKVVIGRGGETINGIIDATGVKIDIDQTGNVS
IASSDQDMINKARQMIEDLVREVEVGQVYTGKVKRIEKFGAFVEVLPGKDGLVHISELEH
RRVAQVEDVLKIGDVVEVKVIEIDNQGRINLSRKVLLPKD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaacatgtattttctacaactttagcgggccgtccgctatctgtggaaatt
ggcgaattagccaaacaagctaacggcgctgtcttggttcgctacggcgacaccgtagtt
ttatctgcagccgttgcttctaagaaagccgggaccggcgacttcttccccttaactgtt
cactacatcgagaagatgtatgcagtcggtaaagtcccagggggcttcatcaagcgtgaa
ggccgtccatctgaagcggccaccttaactagccgtttgatcgaccgtcccttacgtcca
atgttcccagaaggcgttcgtaatgaaattcaaattaccaacaccgttttatcagttgac
caagactgcaccccagaaatggctgctatgttaggggcatctctggccttggctgtgtca
gacattccatttgacgggcctgttgccggtgttaacgtagggcgcgtcaatggggagatt
gttatcaacccaacggttgcccaagcagaattatctgatatcgaattaacggttgccggt
acggcgactgccattaacatggtggaatcttctgctaaagaagtgtcagaagccgatatg
ttagaagccttactcaaaggtcatgcagccatcaaggaattggtagccttccaaaatgaa
atcgtcgctcaaatcggtaaagagaaattcgagtttaccttggcagaagtggcgccagaa
gtggcggctcaagtaggggaacgctacaagtctcgcatgattcaagccatccaaacccaa
gagaagaaagcgcgtgaagcagctgttgacgctgttatggaagaagcaactgaattcttt
gcagcagtttacgctgaccgtgatgactacgatcaacttatgaaggacgtatccactgcc
ttacacgacttagagaaggacgaagttcgtcgtctcatcactaaggaacgtgttcgtcca
gacggtcgtcgcatcgatgaaatccgtccattgagctcttctgtggccctcttgccacgc
gttcatggttctggtctctttactcggggacaaacccaagtcttaactgctgctaccttg
gcaccgctcggtgagcaccaagtaatcgatggtttaggcatagaagaaggcaaacgtttc
atccaccactacaacttccctaacttctctgtcggcgaaacaggtcgtgtgggtagccca
ggtcgtcgtgaaattggtcacggtgccttaggtgaacgcgccctcaaacaagtgattcct
gcgccagaagatttcccatacactattcggttggtatctgaagtcttggaatctaacggt
tcttcttcgcaagcaagtatctgtgccggtactttggccctcatggatgcaggtgtgcca
attaaggcgccagttgcagggattgccatgggcttggtcatggaaggggaagactacacc
gtcttaaccgatattcaaggtctggaagaccacctaggcgatatggacttcaaggttgcc
gggacagctgccgggattacggccttgcaaatggatatcaagattcaagggattaccgaa
gccatcttaaccgaagctctgacgcaagctaagaaggcccgtttagaaatcttggatgaa
ttggtatctaccttacctgaagctcgtaaggaattgagcccatatgcacctaagattgat
atcatccaaattaacccagataagattaaggtggtcatcggtcgtggtggggaaaccatt
aacggtattattgacgcaactggcgttaagattgatatcgaccaaacgggtaatgtctcc
attgcgtctagcgaccaagatatgattaacaaggctcgtcaaatgattgaagacttagtt
cgtgaagttgaagtaggccaagtctacactggtaaagttaagcgtattgagaaattcggt
gccttcgtagaagtcttgccaggtaaagacggtttggttcatatttctgaattggaacac
cgccgtgtggcacaagtcgaagacgtgctcaagattggcgatgttgtagaggtcaaagtc
attgaaatcgacaaccaaggtcgaatcaacttgtctcgtaaggtcctcttacctaaagac
taa
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