Abiotrophia defectiva: FOC79_02170
Help
Entry
FOC79_02170 CDS
T06623
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03420
Nucleotide excision repair
adc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOC79_02170 (pcrA)
03430 Mismatch repair
FOC79_02170 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_02170 (pcrA)
Enzymes [BR:
adc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOC79_02170 (pcrA)
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC79_02170 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FOC79_02170 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKH46488
LinkDB
All DBs
Position
complement(485236..487632)
Genome browser
AA seq
798 aa
AA seq
DB search
MEVGHVTALDTLIKGLNSKQREAVLTTEGPVLIAAGAGSGKTRVLTHRIAYLIQERQVNP
WNILAITFTNKAAAEMRERVQRLVGEEASSIWVATFHAMCARILRREIETLGYAKNFTII
DQGEQQTLMKQVLRDLNLDSDQYNYKDLLWVIDAAKNQGYLPDDFLASDSGYIHEIHANI
YRNYQKRLKAANALDFNDLILLTVRLLEQNPTIRQFYQQKFQYIHVDEYQDTNHSQYRLV
QLLAGLLKNICVVGDADQSIYGWRGANMANILNFEQDYPQAKVILLEQNYRSTQTILKAA
NSVIENNLQRKDKQLWSDGQVGEKIQIYSADSDLEEADFVTRTIRHLRDQEGANYSQVAV
LYRTQAQSRGLEEALLRSNMPYKVVGGLKFYARKEIQDTLAYLRLLDNPHDNLSLNRIIN
VPKRGIGATTVTKLAEFADSLGVSWFEAIGRLHFSNFSASVQKKLLDFAHLIETLRQQVP
FLPLRDLTEEVWDKTGYLKSLKEEGTVEAANRLENLEEFASVVTQFDQTEREAILEQDPD
YLAQTQGQEEVALAPLTQFLTDVSLMTDADNQEEALDQVTLMTLHAAKGLEFPYVFMVGM
EEGLFPLRRASENPDELEEERRLAYVGMTRAERALYLTASKRRLQYGRTVTNPPSRFLDE
IQPDLVEWLGSGRQSSAYGQSSWKQTWSDSSSWTGLHHQPTANVAPSRTIRKQEAGDRRL
KNQAALRHKGPVAGASTSASGAGQTWQVGDKVLHKTFGQGTIVKVAKAGKDQLLSVAFAS
QGIKDLMAAYAPLTKANE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgggcatgtgacggcgctagatacgttgattaaaggcttaaattcaaaacaa
agagaggcggttctgaccacggaagggcctgtcctgattgcagccggagcaggaagtggt
aagacgcgggttttaactcatcgtatcgcctacctgattcaggagcgccaagtcaatcct
tggaatatcctggccattaccttcaccaataaagcagcagccgagatgagagaaagggtc
caacgtctagtgggggaagaggcttcttctatttgggtggctaccttccacgccatgtgt
gcccgcattctgcgtcgggaaatcgagacgctgggctatgccaagaactttaccattatt
gaccagggcgagcagcagaccctgatgaagcaggtcttgcgggacttgaacttggacagt
gaccagtataactataaggacttgctctgggtcattgatgcggctaagaaccaaggctat
ttgccggatgatttcttagcttctgatagtggctatattcatgaaattcatgccaatatc
taccgtaattatcagaagcgactcaaggccgccaatgccctggactttaacgacctgatt
ttgctgactgtgcgactactcgaacagaatccgaccatccgccagttctatcagcagaaa
ttccaatatatccatgtagatgagtaccaagataccaaccacagtcaatatcgcctggtt
caactcctggcggggttgcttaagaatatttgcgtggtgggggatgccgaccaatctatc
tatggttggcgaggagccaatatggctaatatccttaacttcgagcaggactaccctcaa
gctaaggtgatcttgctagaacagaattaccgttcaactcaaactattcttaaggccgct
aacagtgtgattgaaaataacctccagcgtaaggataagcaactctggagtgacggccaa
gtaggggaaaagattcaaatctactctgctgacagtgacttggaagaagcagattttgtg
acgcggactatccggcatttgcgggaccaagaaggcgccaactatagccaagtagccgtg
ctctatcggactcaggcccaatcacgggggctagaagaagccctcttgcggtccaatatg
ccctacaaggtagtagggggacttaagttctatgctcgcaaggaaatccaggacactttg
gcttatctgcggcttttggacaacccacatgacaacctcagccttaaccgaatcattaat
gtgcctaagcgggggattggggcaacaacggtgaccaagttggctgaattcgcggattcc
ctgggggtctcctggtttgaggccattgggcgcctgcatttctccaatttctcagccagt
gttcagaaaaagctgctggactttgctcacttgattgaaaccctgcgccagcaagtgcct
ttcttaccactccgggacttaacggaagaagtttgggataagacgggttaccttaagtcg
cttaaggaagaagggacggtcgaggcggccaaccgcttggagaacttggaagaatttgcc
tcagtcgtcacccagtttgaccaaacggagcgggaggcgatcttggaacaagatcctgat
tatttggctcagactcagggccaggaagaagtggctttggcgccactgacccaattttta
actgatgtctcccttatgaccgatgcagacaatcaggaagaggccttagatcaggtgacc
cttatgaccctacatgcagccaagggtttggaatttccttatgtctttatggtaggcatg
gaagagggactcttcccactgcgtcgggctagtgagaatcctgacgagctagaagaagag
cgacgtctggcctatgtgggcatgacccgggctgaacgcgccctctatctgactgctagt
aagcgacgcctacaatatggccggacggtgaccaatccacctagtcgatttttagatgaa
atccaacctgatttagtcgagtggttaggttctggccgtcaatcaagcgcctacggccaa
agcagctggaagcagacctggtctgatagctcttcttggacgggcttgcatcatcagcca
accgccaatgtcgcgcctagtcggaccattcgtaagcaagaagcgggtgaccgtcgcctt
aagaatcaagcggcccttcgtcataaggggccagtagctggggctagcacttccgcaagt
ggagcaggccagacttggcaagtcggggataaggtccttcacaagaccttcggccagggc
accatcgttaaggtggctaaggctggcaaagaccaactactgagcgtggcctttgcctcg
caaggcattaaggatttgatggcagcctatgcccctttgactaaggcaaatgaataa
DBGET
integrated database retrieval system
