Abiotrophia defectiva: FOC79_03380
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Entry
FOC79_03380 CDS
T06623
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOC79_03380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adc03021
]
FOC79_03380
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_03380
Enzymes [BR:
adc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOC79_03380
Transcription machinery [BR:
adc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOC79_03380
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOC79_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKH46718
LinkDB
All DBs
Position
complement(746246..747190)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPEIKTIEVSDDAKFGKIVVEPLERGYGTTLGNSLRRILLSSLPGSAVTSIQIDG
VLHEFATVEGIVEDVPTIILNLKKLALKLHTQESKVIELNVTGPKVVTAADIMHDNDVQI
LNPELYICTLADGAELKMRLNVANGRGYVRSEHNKREDMPIGVLPIDSIYTPIKKVNYQV
ENTRIGQKNVYDKLTLDIWTDGSISPEKSLSLAAKILTEHLNIFVNLNDEARQTEIMVEK
EEAEKEKMLIMTIEELDLSVRSYNCLKRAGINTIQELTNKSEAEMIKVRNLGRKSLEEVK
QKLANLELSLRQDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccagaaattaaaacgattgaagtcagtgacgatgccaaattt
ggtaaaattgtcgttgaaccacttgaacgtggatatggaacaacccttggaaattcatta
cgtcgtattttattatcttcattacctggttccgctgttactagcatccagattgatgga
gtactgcatgaatttgctacagttgaaggtatcgtggaagatgttccaacgattatcttg
aacttgaagaaattagcattgaaacttcacactcaagagtcaaaagtaattgaattaaac
gtcaccggtccaaaagttgtgaccgcagctgatattatgcatgataacgatgtgcaaatc
ctcaaccctgagctctacatttgcaccctggctgatggcgctgaattgaagatgcgtctc
aacgtagccaacggtcgtggttatgtacggagtgaacacaacaaacgggaagacatgcca
atcggcgtcttaccaatcgattcgatctataccccaattaagaaggtaaactatcaagtc
gaaaacacccgtatcgggcaaaagaacgtttatgataaattaactttagatatttggacc
gacggttcaattagtcctgaaaaatcattaagtttagccgctaaaatcttaacggagcac
ttgaatatcttcgttaacctcaacgatgaagcgcgtcaaactgaaattatggttgagaag
gaagaagctgaaaaagagaaaatgttaatcatgacgattgaagagttagacttatccgtt
cgttcatacaactgtttgaaacgcgcgggtatcaacacgattcaagagttgactaacaaa
tcagaagcagaaatgattaaagtacgtaaccttggccgtaaatcattagaggaagtcaaa
caaaaattggctaaccttgagttgagcttacgccaagacgactag
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