Abiotrophia defectiva: FOC79_03585
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Entry
FOC79_03585 CDS
T06623
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
adc
Abiotrophia defectiva
Pathway
adc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC79_03585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adc03019
]
FOC79_03585
Messenger RNA biogenesis [BR:
adc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOC79_03585
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QKH46758
LinkDB
All DBs
Position
complement(785793..787166)
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AA seq
457 aa
AA seq
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MTQEITTQVRFWGGLDTIGGNIVSLEAGNYRILTDFGALFGASLEELKQVDLTPSLLEKG
HLPAIDGLYTRQQLGASDLASYEETDMKTIVCLSHLHLDHIGGFGQLPEDLPIYALEDSV
SFYQRLASDGLLPDFKVNWQAVQSEVPFQFGPFTIEFVVSDHDTIGAASIFITGPDLKVV
NSGDFRLTGFHPERVLHWAQKARDFQPDLFLVEGTTFSFDPGSRDDRMQLPEDLAARVAS
ISAGNEAKFLKDFTQVVAQAGNQLVALNVYPQNIERLVYMAQALNRAGRTLVLEPNYYRL
LRPYMAPEAALATINWDGDSKLPVQDVLTWDQVQAAPAQYAVQVDYEQHHDYIFSLSEGI
YIHSNGVPLGAYDARYQPWLEGIVKAGWQFYHGHVSGHASTQDLCLVNYVVGAKLVVPWH
SFKPERYAEALVDLGLTPWLPSLDTTYSADQIKSLAD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaaatcacgacccaggtaagattttggggaggacttgataccataggtggt
aatattgtcagtctagaagcgggtaactaccgtattctgacagattttggcgctttattt
ggagcgagcttggaagaattgaagcaagtcgacttgaccccaagcctgctagaaaagggg
catctgccggccattgatggcctctacacccgccaacaactaggcgcaagtgacctggca
agctatgaggagaccgatatgaagaccatcgtctgcctatcccacctccatctagaccat
attgggggcttcggtcagttgcctgaggacctacccatctatgccttagaagacagtgtt
tccttctaccaacgtctagcaagcgacggcttgttgcctgatttcaaggtcaattggcaa
gccgttcaatcagaggtgcctttccaatttgggccttttacgattgagtttgtggtcagc
gaccatgacaccattggggcagctagcatcttcatcaccgggccagaccttaaggtggtt
aactctggtgacttccgtttaactggtttccatccagaacgcgtcttacactgggcgcaa
aaagcccgggacttccagcctgacctcttcttagttgaagggacgaccttcagctttgac
ccaggatcacgcgatgatcggatgcagctgccagaggacttggctgctcgcgtagcctca
atttcagcaggcaacgaagccaagttcctcaaggactttacccaagtggttgcgcaagct
ggcaatcagttagtggcgcttaacgtctatccacaaaatattgaacgtctagtctatatg
gcgcaagcgctcaatcgtgcaggacggactctggtcttagagcctaactactaccgtctc
ttgcggccttacatggcaccagaggcagccttggcaaccatcaactgggatggcgacagc
aagctgccagttcaagatgtcttgacctgggaccaagtgcaggcagcacctgctcaatac
gctgtccaagtcgactatgaacaacaccatgattatatcttcagcctatcggaaggtatc
tacattcactccaacggggtgccgctaggagcttatgatgcgcgttaccaaccttggttg
gaaggcatcgtcaaagcaggttggcaattctatcatggccatgtgtctggccacgcttct
actcaagacctctgcttggtcaactatgtggtaggtgctaaactagttgtgccatggcac
agctttaagccagaacgttatgcagaagccttagttgatttagggctgaccccatggttg
ccaagcctagataccacttattcggctgaccaaattaagagcctagctgactaa
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