Abiotrophia defectiva: FOC79_03675
Help
Entry
FOC79_03675 CDS
T06623
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
adc
Abiotrophia defectiva
Pathway
adc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOC79_03675 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_03675 (uvrA)
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC79_03675 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOC79_03675 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_21
AAA_16
AAA_29
RsgA_GTPase
AAA_23
BCA_ABC_TP_C
AAA_22
nSTAND6
nSTAND3
MMR_HSR1
DnaJ_CXXCXGXG
Viral_helicase1
Dynamin_N
IIGP
DUF87
DUF463
Motif
Other DBs
NCBI-ProteinID:
QKH46775
LinkDB
All DBs
Position
complement(803619..806447)
Genome browser
AA seq
942 aa
AA seq
DB search
MAKDKIVIKGARSHNLKNINLEIPRDQLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEINDYLRLLYARVGVP
YCPHHHIPIQRQSVEQMVNQVLDLPERTRIQILSPLIRNQKGQHQKTLEKINKDGFVRVR
VDGQIYDVTEVPELAKNTKHNIDVVVDRVVIKDGVRSRLFDSMETALKLSEGYVIIDVID
GQEMRFNEHFACPHGDFQMGELEPRLFSFNAPFGACPSCDGLGSRLVVDEALAIPDENLT
LEEGAFVAWNPISSNYYMSMMRQFCEQEGIPMDVPYKKLKKSQQADLKYGVKDGRSFKFT
YTPMSGNGTRTVDTVFEGVITNMERRYNDTGSDYTKEVMRQYMVEHICPACQGQRLNPTA
LSVRVGDLNIAQATELSISDALAHFKSLTFGPADEVIAKPIIKEVTDRLTFLNNVGLDYL
TLSRVAGSLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNSRLIQSLTQMRDLG
NTLIVVEHDEETMMTADYIIDIGPGAGEHGGQVVACGTPEEVMKNPNSLTGKYLSGQEKI
ALPASRRQEDKGWVTVTGANENNLQNVTAKFPLGRFVAVTGVSGSGKSSLVNAILKQALL
KELTKAKTRPGKFKSIKGYESLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKLRGYNKGRFSFNIKGGRCEACAGGGINKIEMHFLPDVYVPCEVCGGRRYNSETLEIKY
KGLNITEVLDLTVEEAVEFFAAIPKIKRKLQTLLDVGLGYISLGQSATTLSGGEAQRMKL
AAELQRVSTGNTFYVLDEPTTGLHAHDIRKLLEVIDRLVQAGNTVVVIEHNLDVIKTADY
VIDLGPEGGVRGGQIIATGTPEEVAKVKGSFTGQYLKPLLKK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagataaaattgtaatcaaaggggcacgttcccataacttaaaaaatattaac
ctagagattccgcgtgaccagctggtggtagtgacggggctttccgggtcaggtaagagc
tccctggcctttgacaccctctatgcggagggtcaacgtcgctatgtggagagtttgtcg
gcctatgcccgccagttcctaggtcaaatggataagccagatgtggactccatcgaaggc
ctgagcccggctatttccatcgaccagaagaccactagccacaacccgcggtcaacggtc
ggtacggtaaccgaaattaacgactacctgcgtttgctctatgctcgtgtgggggtaccc
tactgtccccatcaccatattcctattcaacgccaatctgttgaacagatggtcaaccag
gtcctagacctacctgagcgtacgcgtatccaaattctgtcccctctgattcgtaatcaa
aaaggccagcatcagaagaccctggagaagattaacaaggacggttttgtccgggtgcga
gtggatggccagatttatgatgtcaccgaagtgcctgaactagccaagaataccaagcac
aatatcgacgtcgtggtggaccgggtcgtcatcaaggatggcgtccgctcccgcctcttc
gactccatggagactgccctcaaactatctgaaggctatgtcattatcgatgtcattgac
ggtcaggagatgcgtttcaatgaacactttgcctgcccgcatggcgatttccagatgggc
gagttggagccccgtctcttctccttcaatgcgccttttggtgcctgcccaagctgtgac
ggcttaggttcccgtctagtagtggacgaggccttggctattcccgatgaaaatctgacc
ttggaagaaggggcctttgtcgcttggaatccaatcagttccaactactatatgtccatg
atgcgccaattctgtgaacaggaaggcatccccatggatgttccttataagaagctcaaa
aagtcccagcaagcagaccttaagtatggggtcaaagacggacgcagcttcaaattcacc
tataccccaatgtcgggaaacggcacgcggacggtggatacggtctttgaaggagttatt
accaatatggaacgccgctacaacgatacgggttccgactacaccaaggaagtcatgcgc
cagtacatggtcgagcatatctgcccagcctgccagggccaacgtctcaacccaacggcc
ttatcagttcgggtaggggacctcaatatcgcccaagccaccgaattgtctattagtgat
gccttggctcacttcaagagcctgacctttgggccggccgatgaagtcattgctaagccc
attatcaaggaagtgaccgatcgcctgaccttccttaataatgtggggttagattatctg
accttgagccgggtggctggttccttgtcaggtggggaagcgcaacgtattcgtctggct
acccaaattggctccaacctcagtggggtcctctatatcttggatgaaccttcaatcggt
ctccaccaacgtgataactctcgtctcattcagtcgctgactcagatgcgggacttgggc
aataccctgattgtggtggaacacgacgaagaaaccatgatgacagccgactatattatt
gatattgggccgggtgctggtgagcacggtggccaagtggtcgcatgtgggacaccagaa
gaggtcatgaagaatccaaattccttaacaggtaaatacctgtcaggtcaggagaaaatc
gccttgccagccagccgtcgtcaggaagacaagggttgggtgaccgttacgggagctaac
gagaacaacctgcagaatgtcaccgccaagttccccttagggcgctttgtcgcagtgacg
ggggtttcgggctcaggtaaatccagtttggtcaatgccatcctcaagcaggccttgctc
aaggaactgaccaaggccaagacccgtccaggtaaattcaagtcgatcaagggctacgaa
agtttagacaagattatcgacattgatcagagcccaatcggccggacgccgcgtagtaac
ccagcgacctatacgggggtcttcgacgatattcgagacctctttgcccagaccaatgaa
gccaagttgcgcggttataacaaagggcgcttcagcttcaatatcaagggcgggcgttgt
gaagcctgtgccggtggcgggattaacaagattgagatgcacttcctgccagacgtctac
gtgccttgtgaggtctgtggtggccgtcgctataactctgaaaccctggaaatcaagtac
aagggcctcaacatcaccgaagtgctagacctaaccgttgaagaagcggtggagttcttc
gctgcgattccaaaaattaagcgcaaactccaaaccttgctagatgttggtttaggctat
attagcctgggtcagtctgctactaccctgtcaggtggggaagctcaacgtatgaagttg
gcggccgaattgcagcgggtttcgacaggcaacaccttctatgtcttggatgaaccaacg
accgggcttcatgcccacgacatccgcaagttgctagaggtcatcgaccgcctagtccaa
gcgggcaataccgtagtggtcattgaacataatctggatgtcattaagaccgccgactat
gtcatcgaccttgggccagagggcggggttcgcggtggtcagattatcgccaccgggaca
ccggaagaagtagccaaagtcaagggctccttcaccggccagtacctcaaaccattattg
aaaaaataa
DBGET
integrated database retrieval system
