Abiotrophia defectiva: FOC79_03735
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Entry
FOC79_03735 CDS
T06623
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03030
DNA replication
adc03430
Mismatch repair
adc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC79_03735 (dnaX)
03430 Mismatch repair
FOC79_03735 (dnaX)
03440 Homologous recombination
FOC79_03735 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adc03032
]
FOC79_03735 (dnaX)
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_03735 (dnaX)
Enzymes [BR:
adc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC79_03735 (dnaX)
DNA replication proteins [BR:
adc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC79_03735 (dnaX)
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC79_03735 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_19
TIP49
AAA_2
AAA_7
AAA_assoc_2
Rad17
AAA_16
AAA_14
AAA_18
AAA_28
AAA_24
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QKH46785
LinkDB
All DBs
Position
complement(812649..814616)
Genome browser
AA seq
655 aa
AA seq
DB search
MSYQALYRVWRPQSFDELVGQPLIAETLKNAVKNQQLSHAYLFTGPRGTGKTSAAKILAK
AVNCPHQTDGNPCNQCELCQAITAGQLSDVIEIDAASNNGVEEIRDLRDKVRYAPSQATY
KVYIIDEVHMLTTGAFNALLKTLEEPPAQVLFILATTEPHKIPATIISRTQRFDFGRISQ
ADLVGRMQYILEQDGIDFEAEALAVIARAANGGMRDSLSLLDQALSYNRSAVTVQSALEV
TGSLSQLVYIDYLTALQAQDGPKALSILQASLQEGKQANRFVEELILFCRDLLLTLNSKD
NFTLLTEAELKPLRQAGDNCFYYNLIERLNQALNQMRFATQADLFVEVATIELAQEVANE
PVASGLESGTVADLVRQVQALEAKVRQLEAQLRAGAPAQAVPSPQAPAEDDQPRVPRERP
AGQRQAYHLDTDAIYAVLNEATRQDVSQLKSGWAAWLESLPPQDRVRLTGAEVQAAGPER
ILLAFKSQDFCGRVQQDADFVQELSRQLARHFDRPVALAFVLQSEWSQVRQTYKVLYDQA
GGPIKIGAVAEPIRLALEAEPLEAEQTSPPSDDFQSLEQVMMDLPEAPEASEPGTDLFGL
PMETPEPAQPVADQEDLPTVDPVFAQAPDQDSLPPVVSQALALFGQDVVDIDYEK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagccttatatcgggtctggcggccccaaagttttgacgagttggtggga
caacccctcatcgctgaaaccctgaaaaatgcggtcaagaaccagcaattaagccacgcc
tatttgttcaccgggccacggggaacagggaagacctctgcggccaagattctggccaag
gcggtcaactgcccacaccagacagatggcaatccctgcaaccagtgtgaactttgccag
gccattacagctggccaattaagcgacgtcattgagattgacgcggcctccaacaacggg
gtcgaggaaatccgtgacctgcgggacaaagtgcgctatgcgccgagtcaagcgacctac
aaggtttatatcatcgacgaggtccatatgttgaccaccggggcctttaatgccctgctc
aaaaccttagaagagccaccggctcaggttctcttcatcctagcgacgacggaacctcat
aagattccagccaccattatctcgcggacccaacgcttcgacttcggccgcattagccag
gccgacttagtcggtcgcatgcagtacattctggaacaagatgggattgactttgaagcg
gaagccctagcagtgattgcgcgggccgctaatggtgggatgcgggacagcttgagtttg
ttagaccaagccctttcctataatcgctcagcggtgactgttcaatctgccttggaagtg
acagggtccttgtctcagctcgtctatatcgattacctgactgccctgcaagcccaggac
gggcctaaggccttgagcatcctgcaggccagtcttcaagaaggtaagcaggccaaccgc
tttgtggaagagctaattctcttctgccgggacctcttgttgaccttgaattccaaagac
aacttcaccctcctgaccgaagcagaactcaagcctctgcgtcaagctggggacaactgc
ttttattacaatctaattgaaagactgaatcaggccttaaaccaaatgcgttttgctaca
caggccgatctcttcgtagaagtagccaccattgaattggcccaagaggtcgccaatgag
ccagtagcctctggccttgaatcaggcaccgtggccgatcttgtgcgtcaggtgcaagcc
ctggaggccaaggttcgccaattggaagcccagttgcgtgcaggggctcctgctcaagct
gtccctagccctcaagccccagcggaggatgaccaaccaagggtaccgcgcgagcgtcct
gctggccagcgccaagcctatcatttggacacggatgccatctatgccgtcctcaatgaa
gccacacgtcaagacgtcagccagctcaaaagtggctgggctgcttggctagaatccttg
ccaccacaagaccgcgtgcgcttgacgggcgcagaggtacaggcagcaggtcctgaacgt
attctcttggccttcaagagccaggacttttgtggtcgagtccaacaagatgctgatttc
gtccaagaactcagccgccaactggctcgccactttgaccggccagtcgctctggccttt
gtcttacagagtgagtggagtcaggtgcgccagacttataaggtcctctatgatcaagcg
ggcggtccaatcaaaattggcgccgtggcagaacctattaggctagccctagaggcggag
cctctagaagctgaacaaaccagcccaccatcagacgacttccaaagcctggaacaagtc
atgatggacctaccagaggcgccagaagcaagtgagccaggcactgatttgtttggtctg
ccaatggaaacgccagaacccgctcagccagtagcggaccaggaggacttgccgacggtt
gaccctgtcttcgcacaggcaccagatcaggacagcctcccacctgttgtcagccaagcc
ttggccctctttggtcaagatgtggtcgacattgattacgaaaaataa
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