Abiotrophia defectiva: FOC79_06160
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Entry
FOC79_06160 CDS
T06623
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03030
DNA replication
adc03410
Base excision repair
adc03420
Nucleotide excision repair
adc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC79_06160 (polA)
03410 Base excision repair
FOC79_06160 (polA)
03420 Nucleotide excision repair
FOC79_06160 (polA)
03440 Homologous recombination
FOC79_06160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adc03032
]
FOC79_06160 (polA)
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_06160 (polA)
Enzymes [BR:
adc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC79_06160 (polA)
DNA replication proteins [BR:
adc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FOC79_06160 (polA)
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FOC79_06160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC79_06160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
EDR1_CTR1_ARMC3_pept
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QKH47192
LinkDB
All DBs
Position
1344513..1347155
Genome browser
AA seq
880 aa
AA seq
DB search
MTQRKILLIDGSSLAYRAFFSILDIERFKNKAGLHTNALFSFNRMLDGVLDQFKPTHVLV
AFDKSGHTFRTEQYPEYKAGRQKTPGEFREQLPYFRVLLDAYGIKYYELLHYEADDILGT
LAKAADPDDQVMILSGDKDLTQLASDQVTVYITKKGVSELEPYTPASIWDKYQLTPQQII
DLKGLMGDSSDNYPGIERVGEKTALKLLHQFGTVEGLYQGLDQLKPSKMKENIIRDEANA
RLSKSLARIVQDAPLEITLDDCLLGQRDLAQLSEFYVQMDFRSFLAQLHQGAEVVASQET
TRYPVTWLETIEEDHVKLDGAFYLETLSENYHFEPVLAVAWTQGDQAYATSGKVAFASSA
FRKWLEDGDLPKISADLKRDSILLDHQGLTLAGVTFDVGLAAYLVDVEKIKDLTSLATYL
DLGIQVQLDEVVYGKGVKQALPENERLAQHLADKVSLLDQAVAPLTQQLDDLGMTQLYQD
MEFPLAQVLTDMEKRGVAVDVATLDQMNDLLLARLEELEAEIQTLAGQAFNPNSPKQLGE
ILFERLGLPVIKKTKTGYSTAADVLEKLKDAHPIVAALLTYRQLAKLQGTYLAGLPKFIQ
ADGKIHTRFVQTLTQTGRLSSADPNLQNIPIRMEEGRKIRQAFVPSEPGWQLFGADYSQI
ELRVLAHISGDPHMKQAFLEGQDIHAATARRVFGLAEDEAVNSDMRRQAKAVNFGIVYGI
SDYGLSQNLDMPRKEAKAFIDRYLAEYPGISTFMQEIVAQAKKDGYVSTLWGRRRALPDI
YSSNFNLRSFAERTAMNTPIQGTAADIIKVAMVALDQAIRQRDLQARLLLQVHDELILEA
PQEEIAILEELVPEVMEGAVSLSVPLKVEAASGSNWYQLK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgcaaaattttattaattgatggaagcagtttggcctatcgggccttcttc
tccattttggatattgaacgatttaagaataaggcgggcctacataccaatgccttgttt
agctttaaccgtatgctggatggggttctagaccagtttaagccgactcatgtcttggtg
gcttttgacaagtctggtcatacctttcggacggaacaatatccagaatataaggcagga
cgccaaaagacaccaggcgagttccgcgagcagctaccttatttccgggtgctcttggat
gcctatggcatcaagtactacgaattactccactatgaagcggacgatatcctaggcacc
ctggctaaggcggcagatccagacgaccaggtcatgatactgtcgggggacaaggactta
acccaattagccagcgaccaggtgacagtctatatcaccaaaaaaggcgtaagtgagcta
gagccttacacgccagccagcatttgggacaagtaccagctgacgccccaacagattatc
gacctcaagggactgatgggcgatagctcggacaactatccgggtattgaacgggtaggg
gagaagaccgcccttaagttgctccatcaatttgggacggtcgaaggcctctatcaaggt
ctggatcaactcaagccttccaagatgaaggaaaacattattcgggacgaagctaatgcc
cgcctcagtaagtcactggcccgcattgtccaagatgcgccactggaaatcaccctcgat
gattgcctactaggacagcgtgacctagctcagttaagtgaattttatgtccaaatggat
ttccgtagcttcttagcccaactgcatcaaggggcggaagtcgtcgctagtcaagagacc
actcgctatcctgtgacttggttggagaccattgaagaagaccatgttaagctagacggt
gccttctatctggagactctcagcgagaattatcactttgagccagtcctagcagtggca
tggacccaaggcgaccaggcttatgccacaagtggcaaagtcgccttcgctagctcagcc
ttcagaaaatggttagaagatggagatcttcctaagatcagcgcagacctcaagcgagac
agcatcttgctggaccatcaaggcctgacactagcgggtgtgaccttcgacgtgggcctg
gcggcttatctggttgatgtcgagaagattaaggatctaactagcctggccacctatcta
gacttggggattcaagtccagctggatgaagtagtctatggcaagggtgtcaaacaagct
ctgccagaaaatgagcgcttagcccagcacttggcggacaaggtttcacttttggaccag
gccgtagcccccttgacccaacaactggatgacctgggtatgacccagctctaccaagac
atggaattcccgctggctcaagtcttgacggacatggagaaaagaggggtagcggtcgat
gtggccactctggatcagatgaatgacttgctcttagcacgcttagaagaattagaggcc
gaaattcaaacattagcaggacaagccttcaatcctaattcgcctaaacagttgggtgaa
atcctcttcgaacgcttaggcttgccggtcattaagaagaccaagactggctactcgaca
gcagccgatgtcctagaaaaactcaaggacgcccatcccattgtggcagctctactgacc
tatcgccagctagctaagcttcagggaacctatttggctggtttacctaagtttattcaa
gccgatggcaagattcacacccgcttcgtccaaaccctgacccagaccggtcgcttatcc
agtgcggatcctaacttgcagaatatccccattaggatggaggaaggtcgcaagattcgt
caggcctttgtgccgtctgaaccaggctggcaactctttggcgccgactactcgcaaatc
gagttgcgggtgctggcccatatttcaggtgatcctcatatgaaacaggcctttttggag
ggccaagacatccatgcggcgaccgcacgacgagtctttggcctagcagaagatgaggcg
gtaaacagcgatatgcgtcgtcaggccaaggcggttaactttggcatcgtttacggcatt
agtgactatggtctgtcgcaaaacttggacatgccgcgtaaggaagccaaggcttttatc
gaccgctacttggccgaatatccaggcatctcgacctttatgcaggaaatcgtggctcaa
gccaagaaagacggttatgtcagcactttgtggggccggcgacgtgccttgccggatatc
tattccagcaactttaacctgcgttcctttgcagagcggacggctatgaatacgccaatt
caaggaacggccgccgatattattaaggtagctatggtggccttagatcaggccattcgt
caacgcgacctccaggctcgtctgctcttacaggtgcacgatgagttgattttagaagca
cctcaagaagaaatcgccattttagaagagttggtaccggaagttatggagggcgctgtt
agcctatcagtaccactcaaggtagaggcagccagtggtagcaactggtatcaactaaaa
taa
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