Abiotrophia defectiva: FOC79_08665
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Entry
FOC79_08665 CDS
T06623
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adc
Abiotrophia defectiva
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adc03016
]
FOC79_08665 (truB)
Enzymes [BR:
adc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FOC79_08665 (truB)
Transfer RNA biogenesis [BR:
adc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FOC79_08665 (truB)
Prokaryotic type
FOC79_08665 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QKH47668
LinkDB
All DBs
Position
1892374..1893303
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AA seq
309 aa
AA seq
DB search
MYHGILVINKPVGMTSHDVVFKLRKILRTKRIGHTGTLDPNVAGVLVCCIGQATKLVEDL
MDGQKGYRGEITLGFSTETEDADGAPVERKRLEDPVSDAEIDAAMATFLGEIVQIPPYYS
AVKVAGKRLYEYARAGQQVERPRRIARIDRFERLGASEFDPQEGLQRWSFDVQCGKGTYV
RTLAVDLGAKLGYPSHMSHLVRYLTGGYSLSQAHSLEEVAQAADQGRVGQILVPLDQAIN
FCPHYHLQDSEWPMVKNGQVVPGTAFSQTIQQATACFYQGKVQAIYGPHPSKPGMVKPLK
MFTYEEESR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacggaatcttggtaatcaataaaccagttggcatgaccagtcacgatgttgtc
tttaaattacgcaaaattctcagaaccaaacgcattggccacaccggtaccttggatcct
aacgtagcaggcgtcttagtctgttgtatagggcaggctactaagctagtggaggatctc
atggacggacaaaagggctaccgaggtgaaattaccttaggattttctaccgagacagag
gatgccgacggggcgcctgtcgagcggaagcgacttgaagatccagtgtctgatgccgaa
attgacgccgctatggcgacttttctgggagaaattgttcagattccaccttactattcg
gcagttaaggtagccggcaagcgcctctatgaatatgcccgtgcgggtcagcaagtagaa
cgtccgcgccgaatagctcggattgaccgctttgaacgactgggggccagtgaattcgac
ccacaagaaggtctacaacgttggtcttttgatgttcaatgcggtaaggggacctatgtc
agaacgcttgcagttgatttaggcgctaagttaggctatccaagtcacatgtcccatctg
gtccgctacctaacggggggctacagcctgtctcaggcccatagcctagaagaagtagcc
caagcggcagatcaagggcgggtgggccagatcctagtgccactggatcaagcgatcaac
ttctgcccacactaccacttgcaagattcagagtggcctatggtcaagaatgggcaggtt
gtgccaggcacggccttcagccaaactattcagcaggccactgcttgcttctaccaaggc
aaagtacaagctatttatggaccacatccaagcaaacccggcatggtcaagcctttaaag
atgtttacctatgaagaggagtcacgatag
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