Adhaeribacter radiodurans: HUW48_10260
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Entry
HUW48_10260 CDS
T06731
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
add
Adhaeribacter radiodurans
Pathway
add03030
DNA replication
add03430
Mismatch repair
add03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
add00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUW48_10260
03430 Mismatch repair
HUW48_10260
03440 Homologous recombination
HUW48_10260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
add03032
]
HUW48_10260
03400 DNA repair and recombination proteins [BR:
add03400
]
HUW48_10260
Enzymes [BR:
add01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUW48_10260
DNA replication proteins [BR:
add03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUW48_10260
DNA repair and recombination proteins [BR:
add03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUW48_10260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DUF7508
DNA_pol_A_exo1
DEDDh_C
RNF34L-like_3rd
TagH_C
Motif
Other DBs
NCBI-ProteinID:
QMU28395
UniProt:
A0A7L7L788
LinkDB
All DBs
Position
complement(2485877..2487280)
Genome browser
AA seq
467 aa
AA seq
DB search
MYAIIDIETTGGQPTQDRITEIAIFIHDGNQVVDQYNTLINPERPIPFFITQLTGITDDM
VREAPKFHEVAKEIVQFTEGKIFVAHNVRFDYSFIKKEFADLGFNYQRKTLCTVRLSRSL
IPGLPSYSLGKLCKSVDIDLQMRHRAIGDAEATAKLFDKLIKLNQPAIANSDDALAPSSK
KLLSQEMRTSLLPPAISRSQIDALPDSPGVYYFYDETGEIIYVGKSINIRKRAIQHFNID
VKSRKSIEFKNRIADISFELMGNELVALLFESDEIKRLKPHYNRQQRRSVFNSGIYAYYD
QNGYKRLTYQKVSSTNPPIIALSNHFKSKDFLFHKVGKFNLCQKLCDLYKTNGACFDYQV
HQCKGACINKESPEEYNARVDQAIESFTYENDSFVIIGKGREPGERTIVCVENGRYLGFG
FVDETFSASNIEDFKSVIKLYNDNKDIQQIIRGYLRTKHRDKVIIFS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgctattattgatatcgaaacaaccggagggcaacctacccaggaccggattacc
gaaatcgcgatttttattcacgatggcaaccaggtagtagaccagtataataccttgatt
aatccggagcggcctattcctttttttataacgcaacttaccggcatcaccgacgatatg
gtacgggaagcacccaagtttcatgaagtagcaaaagaaattgtgcagttcaccgaagga
aaaatattcgtggcccacaacgtgcggtttgattattctttcattaaaaaagaattcgcc
gatttaggttttaactaccaacgtaaaacgctttgcaccgtgcgcttaagtcggtcgctt
ataccgggtttgccttcttatagcttaggcaaattgtgtaaaagcgtggatatagatcta
caaatgcggcaccgcgctattggcgatgccgaagccacggctaagttatttgataaatta
ataaaattaaatcaaccggctattgctaattctgatgatgctttagcaccgagcagcaaa
aaattactgtcgcaagaaatgcggacttcgcttttgccgcccgcgatttccagatctcaa
attgatgcgctgcccgattcgccgggagtatattatttttatgacgaaacaggcgagata
atttacgtaggtaaaagcataaacatccggaagagggcgatacagcattttaacattgat
gttaaaagccgtaaatctattgaattcaaaaaccgcattgctgatatatcttttgagtta
atgggaaatgagctggtagctttgctttttgaatcggatgaaataaaacgcttaaaacca
cattataaccggcagcagcgacgcagtgtatttaattccggcatttatgcgtattacgac
caaaatggctacaagcgcttaacgtatcaaaaggtatcctcaactaatccgcccataatt
gctttatctaatcattttaaatcgaaagatttcctttttcataaagtaggtaaattcaat
ttgtgccagaaactctgcgatttatataaaaccaatggcgcttgctttgattaccaggtg
caccaatgcaaaggagcctgcattaataaagaatcgccggaagaatacaacgctcgcgta
gaccaagccatagaatcgtttacctacgagaatgattctttcgtaattattggcaaaggc
cgggaacctggtgagcgtaccattgtttgcgtagaaaacggccgctacttaggttttggg
ttcgttgacgaaacttttagcgcttctaacatagaggattttaaaagcgtcattaaacta
tacaacgataataaagatattcagcaaataattcgcggctacctgcgcaccaagcaccgc
gataaggttattatatttagttga
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