Adhaeribacter radiodurans: HUW48_10685
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Entry
HUW48_10685 CDS
T06731
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
add
Adhaeribacter radiodurans
Pathway
add03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
add00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW48_10685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
add03019
]
HUW48_10685
03009 Ribosome biogenesis [BR:
add03009
]
HUW48_10685
Enzymes [BR:
add01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUW48_10685
Messenger RNA biogenesis [BR:
add03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUW48_10685
Ribosome biogenesis [BR:
add03009
]
Prokaryotic type
rRNA helicases
HUW48_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Glyco_hydro_38
DUF4342
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QMU28475
UniProt:
A0A7L7L7G2
LinkDB
All DBs
Position
complement(2582663..2584444)
Genome browser
AA seq
593 aa
AA seq
DB search
MNNLRFDELPLSPEMQRAIADMGFEEASPIQTEAIPVLMRGQDVIGQAQTGTGKTAAFAI
PTIESIDENDKSVQALILCPTRELAIQVSEEVNKLIKYKRNISTVPIYGGQAYDRQLRAL
KQGVQIVIGTPGRVMDHIERGTLQLDKVKKIILDEADEMLDMGFREDIEFVLTKIPADRQ
TIFFSATMSKPIMELTKKYQTNPQIVKVVHQTLTVTNIEQVYYEVRNNMKMDVLSRVVDM
YNLKSIIVFCNTKRMVDELVANLQARGYFADGLHGDMNQTQRTNVMAKFKNGTLEILVAT
DVAARGIDVEDLEAVFNYDLPQDEEAYVHRIGRTGRAGKSGKAFSFVSGRDIYKLKDIMR
FTNAKIKLASVPSYEDVAEVKTTLFLSQVKEVIQKGNLTKHISRVERLLAEDFTSLEIAA
ALMKMSMREEKAKEVSKELDGPREGMSRLFVTIGKKDRVNPKDIVEIISDNTSLPASKVG
DISLYDKFSFVEVPKEYTSEIVDKLGRTTMLGKPVSFEKAQKKTAGSGEDRGERGNDRGG
DRERSRGDRGSYSERGGDRGGNRGGFSDRSDRGGFGSRFGGGNFDKKKKRSNY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttaagatttgacgagcttccactctcgccggaaatgcaacgtgctattgcc
gacatgggctttgaagaagcatcacctatacaaaccgaagccattccggtattaatgcgc
ggccaggatgtaattggccaggcgcaaaccggaaccggtaaaaccgccgcttttgccatt
cctaccatcgagagcattgatgagaatgacaaaagtgtgcaagcactgattttgtgccca
acccgggaactggctatccaggtttccgaagaagtaaataaactaataaagtataagcgt
aacatcagcacggtgccaatttatggtggccaggcttacgaccgccaattgcgggcttta
aagcaaggtgtgcaaattgttattggaacgccgggccgggtaatggaccatattgagcgc
ggtacgttgcaattagataaagttaaaaaaattattctggacgaagccgacgaaatgttg
gacatgggttttcgggaagacattgaatttgttttaaccaagattcctgccgaccgtcag
actattttcttttcggccacgatgagtaagcccattatggagcttaccaaaaaataccag
actaatccgcagatcgtaaaagtagtacaccaaactttaacggtaaccaacattgagcag
gtttactacgaagtgcgtaacaacatgaaaatggatgtgttatcgcgcgtagtagatatg
tacaatctaaaatcgatcattgtgttttgtaataccaaacgcatggtagatgaattggta
gcgaatttgcaagcgcgcggttactttgccgatggtttacacggagacatgaaccagacg
cagcgcaccaacgtaatggccaaatttaaaaatggcacgctggaaattctagtagctact
gacgtagctgcccgcggtattgacgtggaagatctagaagccgtatttaactacgactta
ccgcaagacgaggaagcttacgtacaccgcattggccgtaccggccgcgctggtaaatcc
ggtaaagcgttttcgtttgtgtcggggcgtgatatttataaattaaaagatatcatgcgt
tttaccaacgctaaaattaagttggccagcgtaccaagctacgaagatgtagccgaagta
aaaaccactttgtttttgagccaggtaaaagaagttattcaaaaaggaaatttaaccaag
cacattagccgcgtagagcgtttactggccgaagattttacttccttggaaattgctgcc
gctctcatgaaaatgagcatgcgtgaagaaaaagccaaagaagtttcgaaagaactcgat
ggcccgcgcgaaggcatgagccgtttatttgttaccattggtaaaaaagatcgcgttaac
ccgaaagatattgtcgaaattatttcggataataccagcttaccggccagcaaagtaggc
gatattagcttgtacgataagttttctttcgtagaagttccaaaagaatacacttccgaa
atagtagataaattaggtcgcaccaccatgttgggcaaaccggtatcttttgaaaaggcg
caaaagaaaactgctggttccggcgaagatcgtggtgaaagaggtaatgaccggggaggt
gaccgtgaaagaagtagaggcgaccgcggtagctactccgaaagaggtggcgatcgaggc
ggcaatagaggcggcttctctgaccggtcggaccggggtggttttggctcccgctttggc
ggtggtaacttcgataaaaagaaaaaacgtagtaactactaa
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