Adhaeribacter radiodurans: HUW48_20585
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Entry
HUW48_20585 CDS
T06731
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
add
Adhaeribacter radiodurans
Pathway
add03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
add00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUW48_20585 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
add03021
]
HUW48_20585 (rpoC)
03400 DNA repair and recombination proteins [BR:
add03400
]
HUW48_20585 (rpoC)
Enzymes [BR:
add01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUW48_20585 (rpoC)
Transcription machinery [BR:
add03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUW48_20585 (rpoC)
DNA repair and recombination proteins [BR:
add03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUW48_20585 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
Lbh
Motif
Other DBs
NCBI-ProteinID:
QMU30282
UniProt:
A0A7L7LBR3
LinkDB
All DBs
Position
complement(5150916..5155229)
Genome browser
AA seq
1437 aa
AA seq
DB search
MTFAKNKKLVQDFSKITISLSSPESILERSNGEVTKPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFKSLPNKI
GYLLGLPTKKLDQIIYYERYVVVQPGILAEDGVNTLDFLTEDEYLDMVDKLPRENQMLDN
SDPNKFIAKMGAEALELLLTRINLDDLSYELRYSAAHETSQQRKGEALKRLRVVEAFRDA
ATRIENRPEWMVIRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRAEGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKNMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDP
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGPAAILEASMLMLASHNILNPANGAPIAVPSQDMVLGLYYVTKGKRTTETEKIA
GEGRIFYSAEEVIIAINEGQLSKHAYIKVRTNVLDENDKIVTKVIETVAGRVLFNQFVPE
EVGFVDELLTKKKLQQIISRVFKATGMARTAQFLDDIKTLGFQSAYKGGLSMGLGDIVIP
KEKDILVEQAKKDVDAVWANYSMGLITDNERYNQVIDIWTRINNQITETLMSRLEKDDQG
FNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKSLQGSVGEIIENPILSNFKEGLDVIE
YFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNEEDCGTLRGLEVSALKDNEDI
VESLSERILGRVNVHDVIDPVTNEMILEAGSEITEEITKKIEATSIETVEIRSVLTCESK
RGICAKCYGRNLSSGRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAVDAAIR
AKFTGEIEFEDVRTIETVNNEGNTVKVVMGRSGEVRIVEPGTNKILISNHVPYGSFLTVE
EGQTITKGDEICSWDPYNAVILSEFDGLISYEALIEGITFREESDEQTGHREKVIIETKD
KTQNPSIVVNPSNGESKGYNIPVGAHLTVEDGEQIRAGQILAKIPRAIGKTRDITGGLPR
VTELFEARNPSNPAVVSEIDGVVSYGGVKRGNREIFIESKDGVKKKYMVPLSKHILVQDN
DFVRAGLPLSDGAITPTDILNIQGPGAVQEYLVNEIQEVYRLQGVKINDKHIEVVVRQMM
QKVMVIDPGDTTFLENQVVDKVTFMEENDTIIDMKVVEDSGDSTNLKPGQIVTSRRLRDE
NSSLKRRDLRAVTVRDAQPAVSKPTLQGITQASLGTQSWISAASFQETTKVLSEAAIKGK
ADELLGLKENVIVGHLIPAGTGLREYNNLIVGSKEEYDALIASKQTTKARQSELQNR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgcaaaaaataaaaaactagttcaggacttttccaaaatcacaattagcctt
tcttctccggaatccattctggagcggtcgaacggcgaagtaacaaagccagaaactatc
aattacagaacatataaaccagaaatgggaggattgttctgtgagagaatttttggtcca
gttaaagattgggaatgtcactgcggtaaatacaaaagaatcagatataaaggtattatc
tgtgaccgttgcggggttgaagttaccgaaaagaaagtacgtcgcgaacgcatggggcat
atagagttagtagtacctgttgctcatatttggtactttaaatccttgccaaataaaata
ggctatttactaggcttaccaactaagaagctcgaccaaattatttactacgagcggtat
gtagtagtgcagccaggtatattagcagaagatggcgtaaatactttagatttcttaacg
gaagatgaatacctggatatggtagataaacttccgcgcgaaaatcagatgctggataac
agcgatccgaataaatttattgctaagatgggtgctgaggcgctggagttattattaacc
cgcataaaccttgatgacttgtcttatgaattacgttattctgctgcgcatgaaacttct
cagcaacgtaaaggagaggctttaaaacgtttgcgcgttgtagaagccttccgggatgcg
gctacccgcattgaaaataggccggagtggatggttattcgcatggtaccggttattccg
ccagaattacggccattagttccattagatggtggtcgttttgctacttctgacttgaac
gacttatatcgtcgggttataatccgcaataaccgcttaaagcgtttgattgagattaaa
gcgccagaggtaattctgcggaatgagaagcgaatgttacaggaagctgtcgactcttta
tttgacaactctcgtaaagttaatgcagttcgggcagaaggtaaccgggccttgaaatct
ctttccgatatgttgaaaggtaagcaaggtcgtttccgtcagaacttattaggtaagcgg
gttgactattctggtcgttcggttattgtagtaggtccggagcttaaattgcatgaatgc
ggtttacctaaaaatatggcagccgagcttttcaagccgttcattattcgtaaactgatt
gagcggggtattgtcaaaacagtaaaatcggctaaaaaaattgtggaccgcaaagatccg
gttgtatgggatatcttagaaaatgtattgaaaggacatcctgtattacttaaccgcgct
ccaactctgcaccgtttaggtattcaagcttttcagccaaaactgattgaaggtaaagcg
attcagctacatccattagtatgtaccgcattcaacgctgactttgacggtgaccaaatg
gcggtgcacgtaccactgggaccagcagctattttggaagcttctatgttaatgttggcc
tcccataatatcttgaaccctgccaatggtgctcctattgctgtaccatctcaggacatg
gtattgggtttgtattatgtaactaaaggtaagcgtaccactgaaactgagaagattgct
ggggaaggtagaattttctatagtgcagaagaagtaatcattgctattaacgaagggcaa
ttatctaaacatgcctatattaaggttaggactaacgttctggatgaaaatgacaaaatc
gttacgaaagtaatcgaaactgtagctggtcgggtgttatttaatcagtttgtgccagaa
gaagttggtttcgtggacgagctgctaactaagaaaaagctgcaacaaattatttcccgt
gtgtttaaagcaacgggtatggctcgtacagcccaattcctggatgatattaaaacctta
gggttccagtcagcttataaaggtggcctttctatgggattaggtgatattgtaattcca
aaagaaaaagacatcctggttgagcaggctaaaaaagatgtagatgctgtttgggcaaac
tactctatgggtctgattacggacaacgaacgatacaaccaagtaattgatatttggact
cgtattaacaaccaaattactgaaaccctgatgagccgtctggaaaaagacgatcaaggt
tttaactctatctacatgatgatgcactctggagcccgtggttcccgtgagcagattcgt
cagttaggtggtatgcggggtctgatggcaaagccacagaagtcattacagggttcagta
ggtgagattattgaaaacccgattctttctaactttaaagaaggtttagatgtaattgag
tactttatttcgactcacggtgctcggaaaggtttagcggatactgcacttaaaactgca
gatgctggttatctgacccgtcgtttagtagacgtatcgcaagatgttattgtgaacgaa
gaagattgcggtactttacgtggtctggaagtaagtgctttaaaagacaatgaagatatt
gtagaatctctttcagagcgtatcttgggtcgggtcaatgtgcatgacgtaattgacccg
gttactaatgaaatgattttagaagctggaagcgaaattacagaagaaattaccaaaaag
attgaagctaccagcattgaaacagtagagatccgatctgtattaacttgtgaaagcaag
cgtggtatctgtgcaaaatgctatggtcgtaatctttcttctggccgtatggtacagaaa
ggtgaagcagttggtgttattgccgctcaatcaattggtgaaccaggtacccagttaact
cttcgtacattccacgtaggtggtaccgcttcaaacattgcggtagatgcggctattcgt
gccaaatttaccggagaaatcgagtttgaagatgttcggaccatagaaacagttaacaac
gaaggaaataccgttaaagtagtaatgggacgttctggtgaagtaagaattgtagaacca
ggtactaacaaaattttgatctccaatcacgtgccttatggatctttcttaacagtagaa
gaaggacaaaccatcacgaaaggcgatgaaatttgttcttgggatccgtataatgccgtt
attctttcagagtttgatggtttaatttcttatgaagccctcattgaaggtattactttc
cgggaagaatctgatgaacagactggtcaccgggaaaaagtgattatagaaacaaaagat
aaaacccagaatccatcaattgtagtaaatccaagtaacggcgaaagcaaagggtacaat
ataccagtaggagcgcacttaacggtagaagatggagaacaaatccgtgctggccagatt
ttagcaaaaattccacgtgctattggtaaaaccagagatattacaggtggtctgcctcgg
gtaactgaattatttgaagcccgtaacccatctaaccccgcagtagtttctgaaattgat
ggtgtggtatcttatggtggtgtgaaacgtggtaaccgggaaatcttcattgaatcgaaa
gatggcgtgaagaaaaaatacatggtgccattatcaaaacacatcctggtacaagataat
gattttgtgagggctggtttaccattgtcagatggagctattacgccaaccgatattctg
aatattcaaggtccaggtgccgttcaggagtatttggtaaatgagattcaggaagtttat
cgtttacaaggtgtaaaaatcaacgataaacacattgaagttgtcgttcgccagatgatg
cagaaagttatggtaattgatccaggagatactaccttccttgaaaatcaagtggtggat
aaagttactttcatggaagaaaacgataccattattgacatgaaagtagtggaagactct
ggagattctactaatttgaaaccaggccagattgtaacttctcgccgtttacgcgatgaa
aactcaagcttgaaacgtcgtgatctccgtgcagtaaccgtccgggatgctcaaccagcc
gtatctaaaccgaccttgcaaggtattacacaagcgtcgttaggtactcaaagctggatt
tctgctgcatccttccaggagactactaaagtgttaagcgaagcagccattaaaggcaag
gctgatgagctgttaggattaaaagaaaacgttattgttggtcacttgattccagcagga
acaggtttacgagagtacaacaacttaatagtaggttctaaagaagaatatgatgcttta
attgcttctaaacaaacaactaaagcaagacaatcggaattacaaaacagataa
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integrated database retrieval system
