Adhaeribacter radiodurans: HUW48_20590
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Entry
HUW48_20590 CDS
T06731
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
add
Adhaeribacter radiodurans
Pathway
add03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
add00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUW48_20590 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
add03021
]
HUW48_20590 (rpoB)
03400 DNA repair and recombination proteins [BR:
add03400
]
HUW48_20590 (rpoB)
Enzymes [BR:
add01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUW48_20590 (rpoB)
Transcription machinery [BR:
add03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUW48_20590 (rpoB)
DNA repair and recombination proteins [BR:
add03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUW48_20590 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF8806
Motif
Other DBs
NCBI-ProteinID:
QMU30283
UniProt:
A0A7L7LBY1
LinkDB
All DBs
Position
complement(5155332..5159204)
Genome browser
AA seq
1290 aa
AA seq
DB search
MAKHKITERINFASITPVIDYPDFLDVQLQSFRDFFQLETPAENRTDEGLFKVFAENFPI
SDSRENFVLEFIDYHVDPPKYSVDECIDRGLTYSVPLKAKLRLICNDEDNEDFETIEQEV
FLGNIPYMTEKGSFVINGAERVIVSQLHRSPGVFFAQSKHTNGTKLYSARIIPFKGSWIE
FATDVNNVMYAYIDRKKKFPVTTLLRAIGYGTDKDILDLFGLSEEVPADKKTMKKAVGRK
LAARVLRTWTEDFVDEDTGEVVSIDRNEVLLERDSTLTEEDIDTILDSGAKSIILHRENV
NIADYTIIYNTLQKDNSNSEQEAVEQIYRQLRNTEAPDVETARDIIQKLFFSDKRYDLGD
VGRYRINKKLGLDNNWDAKVLTNEDIVLIVKYLIGLINSKAVVDDIDHLSNRRVRTVGEQ
LYAQFGVGLARMARTIKERMNVRDNEEFKPVDLINARTLSSVINSFFGTNQLSQFMDQTN
PLAEITHKRRVSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVHA
RVNNMGFIETPYRKVTDGKVEVETGVVYLTAEEEDTHHIAQANAIIDERGNFLNDRVKGR
FEGDFPVTEPSTYTYMDVAPNQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLLKPQA
PIVGTGLEGRAAIDSRTLIVAEGSGIVEYVDANKVVVKYDLSEDDKLVSFDAEYVTYDLI
KFRRTNQDTCINLMPIVHKGEVVRKGQALCEGYATNDGELALGRNLQVAFMPWQGYNFED
AIVISEKVVRDDVFTSIHIEEFELEVRETKRGEEELTSEIPNVSEEAVRNLDENGIIRRG
AEVKEGDILIGKITPKGETDPTPEEKLLRAIFGDKAGDVKDASLKAPPSLNGVVIETKLF
SRPKKDKNLRAKSKKEVEDLKSHYNSELKAVKNIMVDKLTTLLDGQIANGIKHKFGDEIM
SKGVKFSRKNIAENLFPDKNPYKDESNYAVPEEVNLFKDLILENWTADDRINNMVIGLVK
NYNKRRNNISARFKRERFTLEVGDELPAGIVQLAKVYIAKKRKLKVGDKMAGRHGNKGVV
ARIVREEDMPFLEDGTPMDIVLNPLGVPSRMNIGQIYETVLGWAGLRLGKKYATPIFDGA
SEEQVSAELAEAGVPRYGRTYLYDGLTGDKFDQPVTVGVIYMLKLGHLVDDKMHARSIGP
YSLITQQPLGGKAQFGGQRFGEMEVWALEAFGASHVLQEILTVKSDDVIGRAKAYEAIVK
GDVLPKPNIPESFNVLIHELRGLALEITLD
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaacataaaataactgagcggataaacttcgcttcgattaccccagtaattgat
tatcccgacttcctcgatgttcagcttcaatctttccgtgatttctttcaattagaaaca
cccgctgaaaataggacggatgaaggattatttaaggtgtttgcagaaaatttcccaatt
tctgattcaagggaaaattttgtactcgagtttatcgattaccatgtcgatccacctaaa
tattcggttgacgaatgtattgatagaggattaacttactccgttcctttaaaagcaaag
cttcgtttgatttgcaatgatgaagataacgaagattttgaaaccattgagcaggaagtt
ttcttaggaaacattccttacatgacggaaaaaggatcttttgtaattaatggagcggaa
cgggttattgtttctcaactacatcgttcaccaggcgtattctttgcgcaaagcaagcat
actaatggtaccaagttatattcagcccggattattccatttaaaggttcctggatagaa
tttgctactgacgtaaacaacgttatgtacgcttacatcgaccggaagaagaagtttccg
gttactactttgctgcgtgccattggttatggtacagataaagacattctggatttattt
ggtttgtcggaagaagtaccagccgataaaaaaaccatgaagaaagcggtaggccgcaag
ttagcagctcgggtattacgtacctggacggaggactttgtggatgaagataccggtgaa
gtagtttctatagacagaaatgaagttttattagaacgcgattcaacgttaacggaagaa
gatattgatacaattctggattcaggagcaaaatcaattatcctgcaccgtgagaatgta
aatattgcggattatacaatcatctataatactttacaaaaagataattcaaattcagag
caagaagcagttgaacaaatctaccgtcaattgcggaatacagaagctcctgacgtggaa
acggctagggatataatccaaaagttattcttctccgacaaacgttatgatttaggtgat
gttggacgttatcggattaacaagaagttaggcttagataataactgggatgctaaagtt
ctgactaatgaggatatagtattaatcgtaaagtacctcattggtttaattaattccaaa
gctgttgttgatgatattgaccacttaagcaatcgccgggttcgtacagttggagagcaa
ttatatgcgcaatttggtgttggcttagctcgtatggcccgtaccattaaagaacggatg
aacgttcgggataatgaagagtttaagccagttgatttaatcaatgcaagaacactttct
tctgttattaactctttctttggaacgaaccaattatctcagttcatggatcaaactaat
ccgttagcagagattacgcacaaacggcgggtgtcagctttagggccaggaggtctttcc
cgggaaagagcaggatttgaggtacgtgacgtgcattatacccattatggtcgtttgtgt
acaattgaaacaccggaaggacctaatattggtctgatttcttcgttgtgtgtacacgca
cgcgtgaataatatgggctttattgaaactccttaccgcaaggttacagatggtaaagta
gaagtagaaacaggagtagtttatttgactgccgaagaagaagatactcaccatattgct
caagcgaatgcaatcattgacgaaagagggaatttcttgaatgatagagtgaaaggacga
tttgaaggtgacttcccagtaacagagccatctacttatacctatatggatgttgcacct
aatcaaatcgtatcagtagcggcctcattgattccattcttggagcatgatgatgctaac
cgggctttgatgggatcgaatatgcaacgccaggcggtaccattattaaaaccacaggca
cctattgttggtacaggtttagagggtcgggctgctattgattcacgtactttaattgta
gctgaaggttcaggtatagtggagtatgtagatgcaaataaggtagtagtaaaatacgac
ctgagcgaagacgataagcttgtcagctttgacgctgagtacgtaacctacgaccttatt
aagttccggagaactaaccaggatacctgtatcaatctaatgccgattgtacataaaggt
gaggtagttagaaaaggacaggcattatgcgaaggatatgctactaatgatggtgaatta
gctttaggtcgtaacttacaagttgccttcatgccttggcaaggttataacttcgaggat
gcaattgttatttcggagaaagttgttcgagatgatgtatttacctctatccacattgaa
gaattcgagttggaagttcgtgaaacgaaacgtggtgaagaagaattaacttctgaaatt
ccaaatgtaagcgaagaagcagtccggaacttagatgaaaatggtattatccgtcgcgga
gcggaagttaaagaaggtgatattctgattggtaaaatcactcctaaaggagaaactgat
ccaactccggaagaaaaattactacgtgccatatttggggataaagctggtgatgtgaag
gatgcctcgcttaaagcaccgccttctttaaatggtgtggtaattgagacaaaattattc
tcgcgtccgaaaaaagataaaaacctgcgggctaagtctaagaaagaagtggaagattta
aaatcccattataacagtgagttgaaagctgttaaaaacataatggtggataaacttacc
accttgcttgatggacaaattgccaatggtataaagcataaattcggagatgaaatcatg
tcgaaaggcgtgaaattttcacggaaaaatatcgccgaaaatttattcccagataagaac
ccatataaggacgaaagtaattatgccgttccagaagaggttaacttatttaaggacctg
attttggaaaactggactgctgacgatcgtatcaataatatggttattgggctggttaag
aattataacaagcgtcgtaacaatatttcggctcggtttaagcgggaacgctttacctta
gaagtaggtgatgaattaccagcaggtatagtgcaattggcaaaagtttatattgctaaa
aagcgtaagcttaaagttggtgataaaatggctggtcgccatggtaataaaggggtagta
gctcgtattgttcgcgaagaagatatgccatttttagaagatggaacaccaatggatata
gttttaaatccactcggggtaccatcgcggatgaacatcggtcagatttacgaaacagta
ttgggctgggcaggtttgagattaggtaaaaaatacgctactccaatattcgacggtgct
tcggaagagcaggtgtctgctgagttggccgaagcaggtgttcctcgttatggtcgtact
tatctgtatgatggattaaccggcgataaatttgatcaacctgtaacagttggtgtaatt
tatatgctcaaattagggcacttagtggatgataagatgcacgcgcgttctattggaccg
tattcacttattacgcaacagccgttaggtggtaaagctcaattcggtggtcagcgtttc
ggtgagatggaagtgtgggctttggaggcatttggtgcatcccatgtcttacaggagatc
ttaacggtaaaatcagatgatgtgatcggaagagcgaaggcttacgaggctattgtaaaa
ggcgatgtgttgccaaaaccaaatattcctgaatcatttaatgtattgattcatgagtta
agaggcttggcacttgaaatcacattagattaa
DBGET
integrated database retrieval system
