Adhaeribacter radiodurans: HUW48_25930
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Entry
HUW48_25930 CDS
T06731
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
add
Adhaeribacter radiodurans
Brite
KEGG Orthology (KO) [BR:
add00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
add03016
]
HUW48_25930
Enzymes [BR:
add01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HUW48_25930
Transfer RNA biogenesis [BR:
add03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HUW48_25930
Prokaryotic type
tRNA splicing ligases
HUW48_25930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QMU31702
UniProt:
A0A7L7LFQ6
LinkDB
All DBs
Position
6567349..6568746
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AA seq
465 aa
AA seq
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MARKKLTGHDLMELGFPAGRSISLAISLMQKHYAHLSPAEQLNLLKQAMLAPDKFVTHTV
LGEILIALAKQNNKSEAINLHEQPLPYAVFGDNLIEAEAKEQMDLAMRLPISLKGALMPD
THKGHGLPIGGVLATDGVVIPYAVGMDIACRMHFTLYNVPATILEQKKYQLKQELQDQTR
FGVNTGFEKPQEHEVFDRPEFNQIKILQQLKTRAAYQLGSSGTGNHFVEFGAVTLDSGNN
AFNLPAGDYVGILSHSGARSLGKNIAAYYTQIAMDSCRLPVEAKYLAWLDLQTQAGQEYW
LAMQIANDYAKACHEQIHERLSASFGEAPVACFDNPHNFAWQEQFLGREVIVHRKGAARA
AAGDLNIIAGSMTQPGYLVRGLGNMDAIYSSSHGAGRALSAKKAAQVLYQTEMNGLVKAF
GVELIGGSLQESPMAYKNMHYVMESQQQQVEVVGKFTPKLVRMDR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaaaaagttaacgggacatgacctgatggagttaggttttcccgccggcaga
agtattagcttagccattagcttaatgcaaaagcactatgcccatctatcgccggcagaa
cagttaaacttattaaagcaagcaatgctggcaccagataagtttgtaacccatacagta
ttgggcgaaattctgatagctctggcaaagcaaaataataaatcggaggctataaacttg
cacgaacaacctttgccatacgctgtttttggggataatttaattgaagccgaggcgaaa
gagcaaatggatttagccatgcgcttgccaatatctttaaagggtgctttaatgcccgat
acgcataaaggtcatggtttacctattggaggcgttttggctacggatggagtcgttatt
ccgtacgccgtggggatggatattgcctgccggatgcactttactttatacaatgtgccg
gctactatcctagaacagaaaaagtatcaattaaagcaagaacttcaggatcaaacccgt
tttggggtaaatactggctttgaaaaaccgcaggaacacgaagtgtttgaccggccagaa
tttaaccagattaaaatattgcaacagctaaaaacccgggcagcgtaccagttgggcagc
tcaggtacaggtaaccatttcgtggagtttggggctgtaacgcttgattcgggcaataac
gcttttaacttacctgccggtgactacgtgggtattttatcgcattcgggtgcccgcagt
ttaggtaaaaacattgccgcctactacactcaaattgctatggatagctgccgtttgcca
gtagaagctaaatacctggcctggttggatttgcaaacccaagccggccaggaatactgg
ctggccatgcaaatagccaacgattacgccaaagcgtgccacgaacaaattcacgagcgg
ttaagtgccagcttcggggaagcgccggtagcttgtttcgataacccgcataattttgcc
tggcaagaacaattcctgggccgggaagtaattgtgcaccggaaaggggcggcccgggca
gctgccggagacctgaacattattgcgggctccatgacccagccgggttacttagtgcgg
ggtttaggcaacatggatgctatttattcttcttcgcacggagccggaagagctttgtcg
gcgaaaaaagcggctcaggttttatatcaaaccgaaatgaacggtttagtaaaggcattt
ggggtagaattaatcggcggtagtttgcaagaatcgcccatggcttataagaatatgcat
tacgtaatggaaagccagcagcagcaagtggaggttgtaggcaagtttacgcctaaactt
gttcggatggaccggtaa
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