Anaeromyxobacter dehalogenans 2CP-C: Adeh_0095
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Entry
Adeh_0095 CDS
T00326
Name
(GenBank) Beta-lactamase-like protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ade
Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ade00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Adeh_0095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ade03019
]
Adeh_0095
Messenger RNA biogenesis [BR:
ade03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Adeh_0095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
STAS_2
Motif
Other DBs
NCBI-ProteinID:
ABC79872
UniProt:
Q2IM39
LinkDB
All DBs
Position
complement(113662..115314)
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AA seq
550 aa
AA seq
DB search
MAAPVRIVPLGGLGEIGMNCMAVECDGRIAVVDCGVLFPNENLGVDLIAPDLSWLRERRE
QVGAVFLTHGHEDHLGALPFLLREIPVPVYGTRFTLALLRPRLEEAGVRADLREVRPGDV
RPAGEASPIAAEFLAVTHSIPDACGLALSTPQGTLLHSGDFKIDPAPVRGPGMDLDRIEA
LGRKGVRLLLSDSTNAEREGTSLSESEVGPALEQAFERARGRVFVACFASNVHRLQQIVD
AARAFGRRVAFLGRSMEANARLAQELGYLELPAWMPVSPEEARTLPPRELCVLTTGTQGE
PRSALARLARGEHPDLAVAPGDLVVLSSRFIPGNEIAIGQVVNELCRRGAEVAYEGLAPL
HVSGHAQADEQRRLIRLARPAHFVPIHGEYRHLSRHAAHAAAEGVAGRDVLVDGQVLELA
DAGVRVLEAPVATGRVYTDRDALLGADMGALVVRDRRLLAETGLCIAVLAIERTTGAVVR
GPELFARGVAGFEGAEEELRGEVLAALAELSPQARTDPAEVQEAVRLAVRRFFRRTTGKK
PPVLPVVLEL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgccggtgcggatcgtgcccctgggcgggctcggggagatcgggatgaactgc
atggccgtcgagtgcgacggccggatcgccgtggtggactgcggcgtgctcttcccgaac
gagaacctgggcgtggacctgatcgcgccggacctctcctggctgcgcgagcggcgcgag
caggtgggcgcggtgttcctcacgcacggccacgaggatcacctgggcgccctgccgttc
ctgctccgcgagatcccggtgccggtctacggcacgcgcttcacgctcgccttgctccgg
ccgcggctggaggaggccggcgtgcgcgccgacctgcgcgaggtccgccccggcgacgtg
cggcccgccggcgaggcctcgcccatcgcggccgagttcctggcggtcacgcactccatc
cccgacgcctgcggcctggcgctctcgacgccccagggcacgctgctccactccggcgac
ttcaagatcgacccggcgccggtgcgcggccccggcatggacctcgaccgcatcgaggcg
ctcggccgcaagggcgtgcggctcctgctctccgactccaccaacgcggagcgcgagggc
acctcgctgtccgagtcggaggtgggccccgcgctggagcaggcgttcgagcgggcgcgc
ggccgggtgttcgtggcctgcttcgcctccaacgtccaccgcctgcagcagatcgtggac
gcggcgcgcgccttcggccggcgggtcgcgttcctgggccgctcgatggaggcgaacgcg
cggctcgcgcaggagctcgggtacctcgagctcccggcctggatgccggtgtcgccggag
gaggcgcggacgctcccgccgcgcgagctgtgcgtcctcaccaccggcacgcagggcgag
ccccgcagcgcgctcgcgcgcctcgcccgcggcgagcaccccgacctcgccgtcgcgccg
ggcgacctggtggtgctctcctcgcgcttcatcccgggcaacgagatcgccatcggccag
gtggtgaacgagctctgccggcgcggcgccgaggtcgcctacgagggcctcgccccgctc
cacgtctccggccacgcgcaggcggacgagcagcgccgcctcatccggctcgcccgcccg
gcccacttcgtgcccatccacggcgagtaccggcacctgtcgcggcacgccgcccacgcc
gccgccgagggcgtggccgggcgcgacgtgctggtggacgggcaggtgctggagctcgcc
gacgcgggcgtgcgcgtgctggaggcgccggtggcgaccgggcgcgtgtacacggatcgc
gacgcgctgctcggcgcggacatgggcgcgctggtggtgcgcgaccggcgcctgctcgcc
gagaccggcctgtgcatcgcggtgctggccatcgagcggaccaccggcgcggtggtgcgc
ggcccggagctgttcgcccgcggcgtggccgggttcgagggggccgaggaggagctgcgc
ggggaggtgctggccgccctcgccgagctgtcgccgcaggcgcgcaccgatcccgccgag
gtgcaggaggcggtgcgcctcgcggtgcgccgcttcttccgccggaccaccggcaagaag
ccccccgtgctaccggtggtcctggagctgtga
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