Anaeromyxobacter dehalogenans 2CP-C: Adeh_1107
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Entry
Adeh_1107 CDS
T00326
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ade
Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ade00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Adeh_1107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ade03019
]
Adeh_1107
03016 Transfer RNA biogenesis [BR:
ade03016
]
Adeh_1107
Enzymes [BR:
ade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Adeh_1107
Messenger RNA biogenesis [BR:
ade03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Adeh_1107
Transfer RNA biogenesis [BR:
ade03016
]
Prokaryotic type
tRNA degradation factors
Adeh_1107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_PDCD11
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ABC80882
UniProt:
Q2IQ01
LinkDB
All DBs
Position
1276277..1278526
Genome browser
AA seq
749 aa
AA seq
DB search
MARGRAGPAGPAGRTRPQRGRRVPRKVHMTPIQKTATVGGKEVLLETGKVAKQAHGSVWV
RLGDSIVLVTAVSAAEKKEGIDFFPLTVDYQEKLFAAGRVPGSFFRREGRPTEKETLTSR
LVDRSCRPLFAEGYSNETQVIATVISFDQENDTDVLALTGASAALHISDIPFGGPIAGVR
VARVGGQLVANPTLAQRADADLDVVMAASRDAIVMVEGGAQEVSEAVMIEALLFGQAAVQ
PLLDAQDALRAATGNKPRRAFDPPKNDVELRAKVKALTWEKVKEAYGRDEKHDRYGRLSE
IKKELLQALKEEAAGDAAKLATIALREKEIKGYYEDVKYDYMRKMITDERRRIGGRGMAD
IRKITCEVGLLPRVHGSSLFTRGETQALVATTLGTAEDEQRVEMLTGMVFKKFMLHYNFP
PFSVGEVKFLRSPGRREIGHGALAERALRAVMPPEDQFPYTVRVVSDIMESNGSSSMASV
CGGCLSLMDAGVPIKAPVAGIAMGLIKEGEKIAILSDILGDEDHLGDMDFKVCGTAAGIT
SIQMDIKIGGVTREILEQALSQAAEGRKHILGEMAKALSAPRGSISAYAPRITTIKIRPE
RIKDIIGPGGKTIKDITARTGTSINIEDDGSVSIASPNQDKVEEAIKMIRGLTQEAEVGR
IYMGTVRKIAEFGAFVEIFPGTDGLIHISELSDKRVKSVSDVLSEGEEVMVKVISVDRSG
KIRLSRKEALADSAKKSEGTEPPKGEPAK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagggcgagccggccccgcgggaccagcgggacgaacgcggccgcagcgcggc
cggcgcgtcccgaggaaggtgcacatgacgcccatccagaagaccgccacggtcggcggc
aaggaagtcctcctcgagaccggcaaggtcgcgaagcaggcgcacggctcggtctgggtc
cgcctcggcgactcgatcgtgctcgtgacggcggtctccgccgccgagaagaaggaaggc
atcgacttcttcccgctcaccgtggactaccaggagaagctgttcgccgcgggccgcgtc
cccggcagcttcttccgccgcgagggccgcccgaccgagaaggagacgctcacctcgcgc
ctggtggaccggtcctgccggccgctgttcgccgagggctactccaacgagacgcaggtc
atcgcgaccgtcatctccttcgaccaggagaacgacaccgacgtgctcgcgctcaccggc
gcgtcggcggcgctccacatctccgacatcccgttcggcggccccatcgccggcgtgcgc
gtcgcccgcgtcggcggacagctcgtcgcgaaccccacgctcgcgcagcgcgccgacgcc
gacctcgacgtggtgatggccgcctcgcgcgacgccatcgtcatggtggagggcggcgcc
caggaggtgtccgaggcggtgatgatcgaggcgctgctgttcgggcaggccgcggtccag
ccgctgctcgacgcgcaggacgcgctccgcgcggccacgggcaacaagccgcgccgcgcc
ttcgacccgcccaagaacgacgtcgagctgcgcgccaaggtgaaggcgctcacctgggag
aaggtgaaggaggcctacggccgcgacgagaagcacgaccgctacggccggctctccgag
atcaagaaggagctcctccaggccctgaaggaggaggcggccggcgacgcggcgaagctc
gcgacgatcgccctccgcgagaaggagatcaagggctactacgaggacgtgaagtacgac
tacatgcgcaagatgatcacggatgagcgccgccgcatcggcggccgcggcatggccgac
atccgcaagatcacctgcgaggtggggctgctcccgcgcgtgcacggctcgtcgctgttc
acccgcggcgagacccaggcgctggtggccaccacgctgggcaccgccgaggacgagcag
cgcgtcgagatgctcaccggcatggtcttcaagaagttcatgctgcactacaacttcccg
ccgttctccgtcggcgaggtgaagttcctgcgcagcccgggccgccgcgagatcggccac
ggcgcgctggccgagcgcgcgctccgcgcggtgatgccgcccgaggaccagttcccctac
acggtccgcgtggtctccgacatcatggagtcgaacggctcgtcctcgatggcctcggtg
tgcggcggctgcctgtcgctgatggacgccggcgtgcccatcaaggcgccggtggccggc
atcgccatgggcctcatcaaggagggcgagaagatcgccatcctctccgacatcctcggg
gacgaggaccacctcggcgacatggacttcaaggtgtgcggcaccgccgcgggcatcacc
tcgatccagatggacatcaagatcggcggcgtgacccgcgagatcctcgagcaggcgctc
tcgcaggccgccgagggccgcaagcacatcctcggcgagatggcgaaggcgctctccgcg
ccccgcggcagcatcagcgcctacgcgccgcgcatcacgaccatcaagatccgcccggag
cgcatcaaggacatcatcggccccggcggcaagaccatcaaggacatcaccgcccgcacc
ggcacctcgatcaacatcgaggacgacggctcggtctccatcgcgtccccgaaccaggac
aaggtggaggaggcgatcaagatgatccgcggcctcacccaggaggccgaggtcggccgg
atctacatgggcacggtgcgcaagatcgccgagttcggggccttcgtggagatcttcccg
ggcaccgacggcctcatccacatctccgagctctccgacaagcgcgtgaagagcgtctcc
gacgtcctctccgagggcgaggaggtgatggtgaaggtcatctcggtggaccgctccggg
aagatccgcctctcgcgcaaggaggcgctcgccgacagcgccaagaagtccgagggcacc
gagccgccgaagggcgagccggccaagtag
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integrated database retrieval system
