Anaeromyxobacter dehalogenans 2CP-C: Adeh_1593
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Entry
Adeh_1593 CDS
T00326
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ade
Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ade00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Adeh_1593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ade03021
]
Adeh_1593
03400 DNA repair and recombination proteins [BR:
ade03400
]
Adeh_1593
Enzymes [BR:
ade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Adeh_1593
Transcription machinery [BR:
ade03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Adeh_1593
DNA repair and recombination proteins [BR:
ade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Adeh_1593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ABC81366
UniProt:
Q2II85
LinkDB
All DBs
Position
1824115..1828299
Genome browser
AA seq
1394 aa
AA seq
DB search
MKDIFNFFEKPKDPLSFSAIRISLASPDKIRQWSHGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLGHITLATPVAHIWFLKSL
PSRIGNLLDITLKDLEKVLYCESYIVIDPKETTFQRGELLSEDRYQKALDEFGDDAFSAG
MGGEAVLGLLRGVGPASKEHGEGIPGLANELRAEMKEATSDAKRKKIAKRLKVVEAFVAS
GNKPEWMMLEVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPDI
IIRNEKRMLQEAVDALFDNGRRGKTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYS
GRSVIVVGPELKLHQCGLPKIMALELFKPFIYNKLEEKGYVTTIKSAKKMVEKERPEVWD
ILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHV
PLSIEAQMEARVLMMSTNNILSPAHGKPIIVPSQDIVLGIYYMTRERAFARGEGKVFASP
EEVRAAYDQGEVDLQAKVWVRMDGKRVETTVGRVLLYDIVPRRLSFDAINKVMDKKQLQG
LIDLTYRLCGEKETVLLADRVRSMGYGNATRAGISIALDNMVIPRKKVDLLERATREVDD
IQAQYTEGLITIGERYNKVIDIWAQVTEEVAQEMMGEIGTETAVGTGKDGKREERRQPSF
NPIYIMADSGARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDAIITEYDCGAMDGITLGALVEGGEIIEPMGERI
LGRVALDDILDAFSGNVLVKANEEIDEGRVKLIENSGIDKVKIRSVLTCQARRGICVECY
GRDLARGRKVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRRAEQSTIENRNAGLIK
FNNVSVAKKHDGTLIVMNRNGEIIVTDDQGRERERYGVVYGAKLLVREGQKVEANQLLAE
WDPYSMPIITEVAGRVKYGDLVDGVTISEQVDEITGLARKAVIASKDPDARPRISIKDEE
GKTKKLANSDADARYMLPEGANLVVNDGDEVDAGDVIAKMPRETTKTKDITGGLPRVAEL
FEARKPKEHAVISEIDGVVAFGKDTKGKRKVVITPEVDGKLRPDLAKEYLIGKGKHISVH
TGDRVRAGEALMDGAANPHDILRVLGEKELARWLVDEVQEVYRLQGVKINDKHIETIVRQ
MLRRVRIVDVGDTEFLADEQVEKFAFEEENERVLKAGGRAAQGEPLLLGITKASLSTESF
ISASSFQETTKVLTEAAISGKVDYLRGLKENVIMGRLVPAGTGLGAYKHLDIEVETPVDA
VEEAEEALAVGAEE
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacatcttcaatttcttcgagaagccgaaggacccgctctcgttctcggccatc
cggatctcgctcgcgagcccggacaagatccggcagtggtcgcacggcgaggtgaagaag
ccggagaccatcaactaccggacgttcaagccggagcgggacggcctcttctgcgcgaag
atcttcggcccggtgaaggactacgagtgcaactgcggcaagtacaagcgcatgaagcac
cggggcgtggtctgcgagaagtgcggcgtcgaggtgatccagtccaaggtgcgccgtgag
cggctcggccacatcacgctggccacgccggtcgcgcacatctggttcctgaagtcgctg
cccagccgcatcggcaacctgctcgacatcacgctgaaggacctggagaaggttctttac
tgcgagtcgtacatcgtcatcgacccgaaggagaccaccttccagcggggcgagctcctc
tccgaggaccgctaccagaaggcgctcgacgagttcggcgacgacgcgttctccgccggc
atgggcggcgaggcggtgctcggcctgctccgcggcgtcggcccggccagcaaggagcac
ggcgagggcatccccggcctcgccaacgagctgcgcgccgagatgaaggaggccaccagc
gacgcgaagcggaagaagatcgccaagcgcctgaaggtggtggaggcgttcgtcgcctcc
ggcaacaagccggagtggatgatgctggaggtcatcccggtgatcccgccggacctccgc
ccgctcgtcccgctcgacggcggccgcttcgcgacctccgacctgaacgacctctaccgg
cgcgtcatcaaccgcaacaaccgcctgaagcggctccaggagctgaacgcccccgacatc
atcatccgcaacgagaagcggatgctgcaggaggcggtggacgcgctgttcgacaacggc
cggcgcggcaagaccatcaccggcccgaacaagcggccgctgaagtcgctctccgacatg
ctgaagggcaagcagggccggttccgccagaacctgctcggcaagcgcgtggactactcc
ggccgctcggtgatcgtggtcggcccggagctcaagctccaccagtgcggcctgcccaag
atcatggcgctcgagctgttcaagccgttcatctacaacaagctcgaggagaaggggtac
gtcaccaccatcaagagcgcgaagaagatggtggagaaggagcgccccgaggtctgggac
atcctcgacgaggtgatccgcgagcacccggtgctcctcaaccgcgcccccacgctccac
cgcctcggcatccaggcgttcgagccggtgctgatcgagggcaaggccatccagctccac
ccgctggtctgcaccgccttcaacgccgacttcgacggcgaccagatggccgtgcacgtg
ccgctctccatcgaggcgcagatggaggcccgcgtgctcatgatgagcacgaacaacatc
ctgtccccggcgcacggcaagccgatcatcgtgccgtcgcaggacatcgtgctcggcatc
tactacatgacccgcgagcgcgcgttcgcgcgcggcgagggcaaggtgttcgcgagcccg
gaggaggtccgcgccgcgtacgaccagggcgaggtggacctgcaggcgaaggtctgggtc
cgcatggacggcaagcgggtcgagacgaccgtcggccgcgtgctgctctacgacatcgtc
ccgcgccggctgtccttcgacgccatcaacaaggtgatggacaagaagcagctgcagggc
ctcatcgacctgacctaccgcctgtgcggcgagaaggagaccgtcctcctcgccgaccgc
gtccgctcgatgggctacgggaacgccacccgggccggcatctcgatcgcgctcgacaac
atggtgatcccgcggaagaaggtggacctgctcgagcgcgccacgcgcgaggtggacgac
atccaggcccagtacaccgagggcctcatcaccatcggcgagcggtacaacaaggtcatc
gacatctgggcccaggtcaccgaggaggtggcgcaggagatgatgggcgagatcgggacc
gagaccgcggtggggacgggcaaggacggcaagcgcgaggagcgccggcagccgtcgttc
aacccgatctacatcatggccgactcgggcgcccgcggctccgcgcagcagatccggcag
ctcgccggcatgcgcggcctgatggccaagccgtcgggcgagatcatcgagaccccgatc
acggcgaacttccgcgagggcctcaacgtcctccagtacttcatctcgacgcacggcgcc
cgcaagggcctcgccgacacggcgctcaagaccgcgaactccggctacctgacccgccgc
ctggtggacgtggcccaggacgcgatcatcaccgagtacgactgcggcgcgatggacggc
atcacgctcggcgcgctggtcgagggcggcgagatcatcgagccgatgggcgagcgcatc
ctcggccgcgtcgcgctcgacgacatcctcgacgcgttctccggcaacgtgctggtgaag
gccaacgaggagatcgacgagggcagggtcaagctcatcgagaactcgggcatcgacaag
gtgaagatccgctcggtgctcacctgccaggcgcggcgcggcatctgcgtcgagtgctac
gggcgcgacctcgcccgcgggcgcaaggtgaacatcggcgaggcggtcggcgtcatcgcc
gcccagtcgatcggcgagccgggcacccagctgacgatgcggacgttccacatcggcggc
gcggcgtcgcggcgggccgagcagtccaccatcgagaaccgcaacgccggcctgatcaag
ttcaacaacgtgagcgtggccaagaagcacgacggcacgctcatcgtgatgaaccggaac
ggcgagatcatcgtcaccgacgaccagggccgcgagcgcgagcgctacggcgtggtgtac
ggcgccaagctgctggtccgcgagggccagaaggtcgaggcgaaccagctgctggccgag
tgggatccctactcgatgccgatcatcaccgaggtggccggccgcgtgaagtacggcgac
ctcgtggacggcgtcaccatcagcgagcaggtggacgagatcaccggcctggcccgcaag
gcggtcatcgcctccaaggacccggacgcccggccgcgcatctcgatcaaggacgaggag
ggcaagaccaagaagctcgccaactccgacgccgacgcccgctacatgctgccggagggc
gcgaacctggtggtgaacgacggcgacgaggtggacgccggcgacgtcatcgccaagatg
ccccgcgagaccaccaagaccaaggacatcaccggcggtctcccgcgcgtcgccgagctc
ttcgaggcccgcaagcccaaggagcacgcggtcatctccgagatcgacggcgtggtggcg
ttcggcaaggacaccaagggcaagcgcaaggtggtcatcacgcccgaggtggacggcaag
ctccggcccgatctcgcgaaggagtacctgatcggcaagggcaagcacatctccgtccac
accggcgaccgcgtccgcgcgggcgaggcgctcatggacggcgccgcgaacccgcacgac
atcctgcgggtgctcggtgagaaggagctcgcgcgctggctggtggacgaggtgcaggag
gtctaccggctccagggcgtgaagatcaacgacaagcacatcgagacgatcgtgcggcag
atgctgcgccgcgtgcggatcgtggacgtgggcgacaccgagttcctggcggacgagcag
gtcgagaagttcgcgttcgaggaggagaacgagcgcgtgctgaaggccggcggccgcgcc
gcccagggtgagccgctgctgctcggcatcaccaaggcgtcgctctcgaccgagtccttc
atctcggcctcgtcgttccaggagaccacgaaggtgctgaccgaggccgccatcagcggc
aaggtggactacctgcgcggcctgaaggagaacgtcatcatgggccgcctggtgccggcc
ggcaccggcctcggggcctacaagcacctcgacatcgaggtggagaccccggtggacgcg
gtcgaggaggcggaggaggccctggccgtcggggcggaggagtag
DBGET
integrated database retrieval system
