Anaeromyxobacter dehalogenans 2CP-C: Adeh_3929
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Entry
Adeh_3929 CDS
T00326
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ade
Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Adeh_3929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ade03400
]
Adeh_3929
Enzymes [BR:
ade01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Adeh_3929
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Adeh_3929
DNA repair and recombination proteins [BR:
ade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Adeh_3929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
zf_CopZ
RNHCP
Zn_ribbon_SprT
Zn_Ribbon_TF
DZR
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ABC83693
UniProt:
Q2IGI3
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All DBs
Position
4534214..4535176
Genome browser
AA seq
320 aa
AA seq
DB search
MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEAEGRRVAAVRRQGKRVV
LALDGDLFLALHLMIAGRLHWKDPGARLPGKAGLAAFDFPNGTLVLTEAGTKRRAALHLV
RGAAALAALDRGGLEPLGADLAAFAAALRRENHTLKRALTDPSLFSGIGNAYSDEILHRA
RLSPVALTSRLGDAEVARLLEATREVLAGWTARLREAAGSGFPEGVTAFREGMAVHGRHR
QPCPVCGTAVQRIVRAENEVNYCPRCQTGGQILSDRSLARLLKQDWPRTVDELERNPALG
LRPAPEPAASAPKAPRRRTR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctcccggacatcgaggtctacgtcgaggcgctcgccgcgcgggtgctgggt
cagccgctggagcgcatccggctggggaaccccttcctgctccgctccgccgacccgccg
ctcgccgaggcggaggggcggcgcgtcgccgcggtgcggcggcaggggaagcgcgtggtg
ctggcgctcgacggcgacctgttcctggcgctgcacctcatgatcgccggacgcctccac
tggaaggaccccggcgcgcggctcccggggaaggcggggctggcggcgttcgacttcccg
aacggcacgctcgtcctcaccgaggccggcacgaagcgccgcgccgcgctgcacctggtg
cgcggcgccgcggcgctcgccgcgctcgaccgcggcggcctcgagccgctcggggcggac
ctcgccgcgttcgccgccgcgctccggcgcgagaaccacacgctcaagcgcgcgctcacc
gatccctcgctcttctccggcatcggcaacgcgtactcggacgagatcctgcaccgcgcg
cggctctcgccggtcgcgctgacctcgcggctcggcgacgccgaggtggcgcgcctgctc
gaggccacgcgcgaggtgctcgccggctggacggcgcggctgcgcgaggcggcggggagc
ggcttcccggagggcgtcaccgccttccgcgagggcatggccgtgcacgggcgccaccgg
cagccgtgcccggtgtgcggcaccgcggtgcagcggatcgtccgcgccgagaacgaggtg
aactactgcccgcgctgccagaccggcgggcagatcctctccgaccggtccctcgcccgc
ctgctgaagcaggactggccgcggaccgtggacgagctggagcgcaacccggcgctcggc
ctccggcccgcgccggagcccgccgcctcagcgccgaaggcgccgcgccgccggacgcgc
tga
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