Acropora digitifera (stony coral): 107328293
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Entry
107328293 CDS
T04352
Name
(RefSeq) uncharacterized LOC107328293
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107328293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107328293
03400 DNA repair and recombination proteins [BR:
adf03400
]
107328293
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107328293
Messenger RNA biogenesis [BR:
adf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
107328293
DNA repair and recombination proteins [BR:
adf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
107328293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
DEAD
Helicase_C
ResIII
PPV_E1_C
EpoR_lig-bind
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
107328293
NCBI-ProteinID:
XP_015748519
LinkDB
All DBs
Position
Un
AA seq
830 aa
AA seq
DB search
MGVSKASSSRSLLAVSQCLQNMAAEWLVFPTRNTELNETMADFFKIAYMPRVIGAVDGSL
IPIRAPYNNEHMYVCHNGFHAINAMAVCNAKLSYTNFVCSWQGSVHDSAVFNDSMLHAHL
DKGGGQNGWLLGDRGYGIQPYLLTPFRPDDVSTAPQRRYQKAHTKTRNTIERACGLWKFR
FRCLDVSGGALQFNPNCCCISLPSLLCCTTCASMTKHLSLIIYSNPLVNRPWSDGRTTIR
VVHISHRKVGSAELNEDHGLHVCTFNKDVTSIYSNVNLKVKHIICLEAIYHGRDVVAVLP
TGYGKSVIFHLLPLLFLDKINYERGAAAHPVVIVVSPLNALIKDQIRRLQEGNVNAAILN
VKKKTNSEDLEFDLSDANLSQLRDAKYEVIFTHPEAFITCKQGMELFQTAKYQRTVHAIV
IDEAHCILEWGEDFRKDYSQLSMLCATFPQVPVVALTATGSKADIKEIKESLNMKNPLEV
IVNPIRANICYEKVFHKGKGQCYPFGAEALPENRLFAQYHVPQTTAVKDQILKELASPAS
KVRIIFATVAMGMGVDIPSLRCVIHVGPPRTIREYFQETGRAGRDGKPAIAVLHYNNHDI
AKNREGMSNDIRTFCQLETACLRKFLLNCLHANLVQAKSISSRLELVSLAAAQVKEGKTT
LAEFIANRGSKAVDEAIQLAKEFAEAEAHLNRSRKSRIELLQEEVTGESIDGCEGKWLTA
VKQLLQHHEIEERSFCNAIYNALEKGRGKYRNVYIHGPTNCGKSFIVSPLKVIYKAFSNP
ATGSFGWIGAEDAEKEIQSTYLLRKIYVAKILSYQKIPRFLRPRMPRWIA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtcaaaggcaagttctagcagatcgttattagcggtctcccaatgccttcaa
aacatggctgcagagtggctagtgtttccaaccagaaataccgagctaaatgaaacaatg
gctgatttctttaaaattgcatatatgccaagggtgataggagcagtggatggttccttg
atccccattagggctccatacaataacgaacacatgtatgtctgccataacggctttcat
gccatcaatgccatggcagtgtgcaatgcaaaactttcttacaccaactttgtgtgcagt
tggcagggatctgttcatgattcagcagttttcaatgacagtatgctccatgcacacctt
gacaaaggaggtggacaaaatggctggctacttggggatcgtggctatgggatccagcca
tatttattgacacctttcaggcctgatgatgtctccaccgcacctcaaaggagatatcaa
aaggctcacacaaaaacaagaaacaccatcgagagggcctgtggcctatggaagttcaga
tttcgatgccttgatgtatctggtggggcattgcaatttaatcctaattgttgttgcata
tcattaccatcattgctgtgctgcacaacatgtgcatctatgacaaaacacctctccctg
attatatacagcaacccacttgtgaaccggccttggtcagatggacgaaccaccattcgg
gttgttcacatttcccacagaaaagtgggatcagctgagctgaatgaagatcatggcctg
catgtgtgtacttttaacaaggatgtcacaagtatttattctaacgttaatctaaaagta
aaacacattatctgcctcgaggcaatttaccacggacgtgatgttgtcgccgtgttaccc
actggatatggaaagtcggttatatttcatcttcttcctttgttattcctcgacaaaatc
aactatgaacgtggagcagcagctcatcccgtagtaattgttgtttcccctctaaatgcg
ctgatcaaagatcagatcagaaggctccaggaaggaaatgtcaacgcagcgatattgaac
gtgaagaagaaaacaaactcggaggatttggaattcgatctcagcgacgccaacctctcg
cagctaagagatgcaaaatacgaggtgatctttacacatcctgaagccttcataacttgc
aagcaaggaatggagttattccagactgcgaaatatcaaaggactgttcatgccattgta
attgatgaagcccattgtattttagaatggggagaagatttcaggaaagattactcccag
ttgtcaatgttgtgtgccacttttccacaagtgccagttgttgcattaactgcaacagga
agtaaagccgatatcaaggaaattaaggaatctttgaatatgaaaaatccattggaggtg
atagtgaatcctatcagagcaaacatatgttatgagaaggtattccataaaggtaaggga
cagtgttatccctttggagctgaagctttgcctgaaaataggctttttgcacagtatcat
gtcccacagacaactgcagtgaaggatcagatcctgaaggaattggcctcaccagcttca
aaagtgagaataatatttgcaactgtggccatgggaatgggtgttgatatcccgtcctta
aggtgcgtcattcatgttggtccaccacgtacaatccgtgagtattttcaagaaactgga
agggcaggtagagatgggaagcctgcaattgcagtactacactacaacaatcatgacatt
gctaaaaatcgagaggggatgagcaatgacatcaggactttctgtcagctagagactgcc
tgcctaagaaaattccttttgaattgtcttcatgccaatctggtacaagccaaatccata
agctcacgcttagagctggtgtccttagcggcggctcaagttaaagaagggaaaaccacg
ttggcagaatttattgccaaccggggaagtaaagcggtcgatgaagcgattcagttagcg
aaggaatttgccgaggccgaagcacatttaaatcggtctagaaaaagccgcattgaactg
ctacaagaggaggtcaccggcgagagcattgatggttgtgaaggcaaatggcttacagct
gtgaaacagctactccagcaccacgagatcgaggagcgttcattttgtaatgccatttac
aatgcactggaaaaaggtagagggaagtatcgcaatgtttatatacatggtcctacgaat
tgcgggaagtcgtttattgtatcgccactaaaagtgatttacaaggccttctcgaatccc
gctacaggttcgtttggctggataggtgctgaagacgccgagaaggagatacagtccact
tacctgctccgaaaaatttatgtagcaaagatattgagctatcaaaagataccccgtttt
ttgcgacctcggatgccgcgatggatcgcgtga
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