Acropora digitifera (stony coral): 107328670
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Entry
107328670 CDS
T04352
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107328670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107328670
03036 Chromosome and associated proteins [BR:
adf03036
]
107328670
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107328670
Coactivators
SAGA/TFTC/STAGA complex
107328670
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107328670
STAGA complex
107328670
TFTC complex
107328670
SAGA complex
107328670
SLIK complex
107328670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
TFIID_NTD2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD_LRWD1
Cytochrom_D1
DUF7165
Beta-prop_WDR11_2nd
PROPPIN
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
107328670
NCBI-ProteinID:
XP_015748883
LinkDB
All DBs
Position
Un
AA seq
542 aa
AA seq
DB search
MAANAGATSKSNPSKKEKETLLAVLQFLKKNKLPETEKILRQEANCLDSLEELNLQTTPD
SEPDISSVLSAYNSDADPTRYEDYFKYRSNKFVIRMSKDTYQVLKKHLQDQQQELLLSLI
QQHLHFDVFEGRPRNKQTIEATAGAVTGEATFEANKSKVYYGIPPEPDLGVVIEDESEDD
EDKDKPKKKKVKKDSNGPGKKKQEHNPNAPPLNRQLPFPVMKDSDKLVKITLIREAGKRV
RLGPDLLPSICFYSILNAHTSLNTVSISEDSSLLSGGFEDSCVRVWSLTPKKLRMLKPPS
ELAQIDKEAEDVLERIMDHRFVSYSSENLLLEFSLVSPKGHYFATASHDRTARLWSTDHP
QPLRIFAGHVSDVNRVAFHPNCNYVATGSCDRTVRLWDLNTGSSVRFFTGHKGAIYSLSF
SPDGRYLASSGVDKRILVWDLAEGTLLTELKGHSDTVYSLRFSRDGNMLASGGVDNCVKL
WDARAICNPDDDDLERDNDNPASSKCVTYELGSYPTKRTPVHSLHFTLRNLLLASGPFTP
AS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgcgggtgcaacttctaagtcgaatccatcgaaaaaagaaaaagaaacc
ctgcttgctgtgctccagtttttaaagaagaataagttacctgaaactgagaagatcctt
aggcaagaggccaactgtctcgattctttggaagaattaaatcttcagaccactccggat
tccgagccagacatttcttcagttttatctgcttacaacagtgatgctgatccaactaga
tatgaggattactttaaatataggagtaacaagtttgtgatcaggatgtcaaaagatacc
tatcaagtactaaagaaacatttacaggaccaacagcaggagttacttctttcactgata
cagcaacatctccattttgatgtttttgaaggaagaccacgcaacaagcaaacaatagaa
gccacagctggggcagtcacaggggaggctacatttgaagctaacaagagcaaggtttat
tatgggattcctccggaaccggatcttggagtagtaatagaggatgaaagtgaggatgac
gaagataaagataagccaaagaaaaagaaagtcaagaaagattcaaatggaccaggcaaa
aagaaacaggaacacaacccaaatgccccaccattgaaccgccagttaccatttccagtc
atgaaagacagtgataaattggtcaagataacgttgataagagaagctggaaaaagagta
agattaggtccagacctgctcccttccatttgcttctacagcatacttaatgcacataca
agtttgaacactgtcagtatatcagaggactcaagtctattgtctggtggatttgaagac
agttgtgtacgagtgtggagcctcacccccaagaaactccgtatgttaaaaccaccctca
gagctcgcccaaattgacaaggaagcagaggatgttcttgaacgaataatggaccacagg
tttgtttcctattcctccgaaaacttattgttagaattttctctcgtcagtcctaaaggg
cactactttgctacagcttcacatgatcgcacagctcgcctgtggagcacagaccacccg
caaccgctgaggatctttgctggacacgtatctgacgtcaatagagtcgcttttcatcca
aactgcaactacgtagctaccggatcttgcgatcggaccgtgaggctctgggatctaaat
actggcagctcggtccggtttttcaccggtcataagggagccatctattctctctcgttt
tctcccgacggacgttatctggcttcttcaggtgtcgacaagcgtatcctggtttgggac
ctggcagaagggacattactgacagagctgaaaggacattcagataccgtgtactctctg
cgttttagcagagatggaaacatgctcgcttcaggcggcgttgataactgtgtgaagtta
tgggatgctcgcgccatttgcaatcctgacgatgacgatttagaaagagacaacgacaac
cctgcctcgtccaaatgcgtaacttatgaacttggatcatatcctaccaagaggactcct
gtacacagcttgcacttcacgttacgaaacctgcttctggcgtccgggcctttcacaccg
gcttcttag
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integrated database retrieval system
