KEGG   Acropora digitifera (stony coral): 107328816
Entry
107328816         CDS       T04352                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K06237  collagen type IV alpha
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf04382  Cornified envelope formation
adf04512  ECM-receptor interaction
adf04518  Integrin signaling
adf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:adf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107328816
   04518 Integrin signaling
    107328816
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107328816
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    107328816
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:adf04147]
    107328816
   00536 Glycosaminoglycan binding proteins [BR:adf00536]
    107328816
Exosome [BR:adf04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107328816
Glycosaminoglycan binding proteins [BR:adf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107328816
SSDB
Motif
Pfam: Collagen VWA VWA_2
Other DBs
NCBI-GeneID: 107328816
NCBI-ProteinID: XP_015749055
LinkDB
Position
Un
AA seq 1311 aa
MRLRTASLLVLLLQVYRTVNSQGQNDAECNCKPGQKGSRGRPGPVGNRGVQGTEGPPGRD
GLRGFKGYKGNAGVPGGVGPQGDKGLVGVPGFPGLHGIPGIPGIAGPKGFMGLCGCDGEK
GEPGFSGPSGTMGVAGDPGQKGRQGPKGDPYDGPLNATKGAQGDNGTKGEMGPKGPVGPV
GDTGIKGNPGEEGSAGPRGEQGPKGEQGDQAKGNATLLKGEKGMMGSPGEPGEPGEVELV
GPRAEALKGAKGENGSAGEVGIKGLKGDNSSVPGQRGNRGPQGNKGNSGFPGIKGEMGIK
GEAGSGGEPGFKGEPGIAGDRGEAGPAGPMGLKGEDGNNGARGPLGDKGIGIPGERGGKG
QKGNAGPAGNRGEKGDNGDAGPPGDVGHSVFGPKGDVGAVGPEGERGPPGNPGFVGMTGP
MGPAGEDGPSGEKGEKGEQGEEKPGEQGMDGPKGVKGFQGVIGERGLPGAPAKPVFCPEI
GCPPGRPGRPGSPGPQGDPGLQGPQGNQGKKGQKGEKDECPKCAPGPKGMKGNQGIPGTP
GSNGTAGPNGTRGAQGSTGNSGSPGTDGEPGEKGAKGVQGPRGPDGEKGERPIGPRVELY
EPPGPKGDQGENGTKGLPGPQGTNGTRGEDGPPGEQGPNGTQGEGHKLCSFCCVFLSATG
VLKGSVGDVGQLDGPKGEEGDRGVNGSRGDTGAEGQQGVEGIPGRDLQGPAGMIGEEGAI
GVNGSRGQVGDTGDQGSEGPEGPKGEAGAPGDVGEPGESIPGPNGTNGEDGLKGSKVQGE
PGDPGPRGIAGVDGVAGSKGLPGPQGDDGPRGPPGSPGPQGQKGNIGDILCGQLNADYAF
LVDSSGSILEEEYRLLKRFVTQVIDFLLIGENLTHVGLIEYSSRASLQFNFTKSFDKQEI
KKTVEDLPQSFGLTRIDLALKIASQQLFTPEGGMRSLSRKVMVVLTDGNQTGTDKAPNQT
PLVDAVRPFKDMGVKVIAIGIGSVDREQLATLVSNADDILQPSSFQELLTLVQTTVGKSC
RGPPGEKGFEGPKGYTGDVGEKGLVGLPGEMGDQGPAGSQGPTGSPGDKGGVGNKGERGQ
QGPPGKATPGSKGPKGERGDRGLIGEPGLNGLKGLAGQQGDQGAAGGRGSKGNDGVQGET
GAEGEPGANGDKGIVGPPGIEGMVGMNGADGPQGPTGEKGVVGFPGTKGQQGDGGDVGVD
LRGEEGDPGEKGQQGMGGLRGFPGLSGDAGLRGPPGNTTPGEPGDPGAPGIKGAKGEAGP
SQLEGVALEAGPQGDPGRPGKIGMPGLEGDPGDVGEVGENGAKGPAGEPGM
NT seq 3936 nt   +upstreamnt  +downstreamnt
atgaggctaaggacggcctcactactcgtcctacttttacaagtctacagaacagtcaat
tcccagggtcaaaatgatgcggaatgcaactgtaaacctggacaaaaaggttcaagggga
agaccaggtccagtgggaaaccgaggagtacaaggtacagagggtcctcctggacgagat
ggcttgagaggcttcaagggatataagggaaatgctggagtgcctggtggtgtcggtcca
caaggagataagggattagttggcgttcctggattcccaggtcttcatggaataccaggc
attccaggtattgctgggccaaaaggttttatgggactttgtggttgtgatggtgaaaag
ggagagcctggctttagtggcccatcaggtacaatgggtgtcgctggtgatcctgggcag
aaaggccgacaaggtccaaagggtgatccatatgatggtccacttaatgcaacaaaaggt
gctcagggtgataatggaacaaaaggagaaatgggaccaaagggcccagtcggacctgtt
ggtgacactggcatcaaaggaaatcctggagaagaaggatcagctggacccagaggtgaa
caaggccctaaaggagagcagggtgatcaagcaaaggggaatgctaccttattgaaagga
gagaaaggcatgatgggaagcccaggtgagccgggtgaaccaggagaagtggaacttgtt
ggccccagagcagaggctttgaaaggagcaaagggtgagaatggatctgctggtgaggtt
ggaataaaaggactgaagggtgataattcatctgtgcctggccaaagaggtaaccgaggg
ccacaaggaaataaaggaaattcaggttttcctggtataaagggtgaaatggggataaaa
ggagaggctggatctggtggagaacctggctttaagggtgaaccaggtatagcaggcgac
cgaggtgaagctggtccagccggcccaatgggattgaaaggtgaagatggaaacaacggt
gcaagaggtcctcttggagacaaagggattggaatacctggggaacgaggtggcaaagga
caaaaaggcaatgcagggccagctggaaacagaggggaaaagggggataatggtgatgca
ggacctcctggtgatgtgggacattctgtctttgggccgaagggagatgtgggtgctgtt
gggccagaaggtgaaagaggaccccctggcaatccagggtttgtaggtatgacaggccct
atgggaccagctggagaagatggacctagtggggagaaaggagagaaaggggagcagggt
gaggaaaagcctggagagcaaggaatggatggacccaaaggagtaaaaggattccaagga
gtaataggagagcgtggtctaccgggtgctccagcaaagccagtattttgtccagaaatt
ggatgcccaccaggaagacctggaagacctggcagccctggtccacagggagaccctggt
ctgcaaggtccacagggaaaccagggtaaaaaaggtcaaaaaggagagaaggatgagtgc
ccaaagtgtgctcctgggccaaagggtatgaaaggaaatcaaggaattcctggaacacct
ggcagtaatggtacagcaggaccaaacggaacaaggggtgcccaaggttccactggtaat
tctggctcacctggtactgatggcgaaccaggagagaagggtgctaagggcgttcagggg
cctcgtggacctgatggagagaaaggagaaagacctattggcccaagggtagaattgtat
gaacctcctggccccaaaggagaccaaggtgaaaatggcactaagggattgcctggccca
caaggtactaatggcacccgtggagaagatggacctcctggggaacaaggtcctaatggc
acccaaggagaagggcacaagctgtgttcattttgttgtgtttttctttcagccacggga
gtgcttaagggatcagttggtgacgttggacaacttgatggcccaaaaggggaagagggg
gacagaggtgttaatggctcaaggggggacactggtgcagagggacaacaaggagtggaa
ggaattccaggtcgagatttacaaggacctgctggcatgattggtgaagaaggtgctatt
ggtgtcaatggcagcaggggccaggttggtgatactggcgatcaaggtagcgagggtcct
gagggacctaaaggagaggcaggggctcctggagatgtgggagaacctggggaaagcata
cctggtcctaatggaacaaatggagaagatggtctcaaggggagtaaagtccaaggtgaa
cccggtgatccaggccccaggggaattgctggagtggatggagttgctggcagtaaaggc
ttacctggtcctcaaggagatgatggcccacgagggccaccaggatcccctggacctcaa
ggacaaaagggaaatattggagacatcctgtgtggccaactaaatgcggattatgccttt
cttgtggactcctcgggaagcattcttgaagaggaatatcgtctcttgaagcgttttgtc
actcaagtcatcgactttcttctaattggcgaaaatttgacccatgttggtctgattgaa
tacagcagcagagcaagcttgcaatttaatttcacaaaatccttcgacaagcaagaaatc
aagaagactgtggaggacttacctcaatcatttggcttgacgcggattgatttagctctc
aagattgcatcacaacagttatttacaccagaaggaggaatgagatccttatctaggaag
gtaatggtcgttttgactgacggcaaccaaaccggaacagacaaagcccctaatcagacc
cctctagtggacgctgttcggccattcaaggacatgggtgttaaagtgattgcgattggt
attggaagtgtggacagagaacaactggctacattagtctcaaacgccgatgatattcta
caaccaagctcttttcaagaacttctcactttagtgcagacaactgtcggcaaaagctgt
agaggtccgcctggtgaaaaaggctttgaaggtcctaaaggttacacaggagatgtcgga
gaaaaaggtttagtgggtctgccgggagaaatgggtgatcaaggacctgcgggatctcag
ggacccactggctctccaggagataagggaggagtcggtaataaaggagaaagaggccaa
caaggaccaccgggaaaagcaacaccaggatcgaaggggccaaaaggagaacgaggcgat
cgcggacttataggagaacctggtttaaacggtttgaaaggtcttgcgggacaacagggg
gatcaaggagcggctggtggacgggggagtaaagggaatgatggtgtccaaggtgaaaca
ggagctgaaggagaacctggtgccaacggagataaaggtattgttggccctccaggaatt
gaaggaatggttggtatgaatggagctgatggccctcaaggtcctactggtgaaaagggt
gtagttggtttccctggaacgaaaggacagcaaggcgatggtggtgatgttggagttgac
ttacgcggagaggaaggagatccaggtgaaaaaggacaacaaggaatgggcggcttaaga
ggttttcccggattatctggagatgctggtttgcgtgggccgcctggaaacaccacccct
ggggaacctggagatccaggtgcccctggaattaaaggagctaagggcgaagcaggccct
tctcagttggaaggtgtagcacttgaagcaggccctcaaggagaccctgggcgacctggt
aaaatcggtatgcctggactggaaggagatcctggcgatgtaggagaagtgggagagaat
ggggccaagggacccgcaggagaaccgggtatgtaa

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