Acropora digitifera (stony coral): 107328816
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Entry
107328816 CDS
T04352
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04382
Cornified envelope formation
adf04512
ECM-receptor interaction
adf04518
Integrin signaling
adf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107328816
04518 Integrin signaling
107328816
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107328816
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107328816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
adf04147
]
107328816
00536 Glycosaminoglycan binding proteins [BR:
adf00536
]
107328816
Exosome [BR:
adf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107328816
Glycosaminoglycan binding proteins [BR:
adf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107328816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
107328816
NCBI-ProteinID:
XP_015749055
LinkDB
All DBs
Position
Un
AA seq
1311 aa
AA seq
DB search
MRLRTASLLVLLLQVYRTVNSQGQNDAECNCKPGQKGSRGRPGPVGNRGVQGTEGPPGRD
GLRGFKGYKGNAGVPGGVGPQGDKGLVGVPGFPGLHGIPGIPGIAGPKGFMGLCGCDGEK
GEPGFSGPSGTMGVAGDPGQKGRQGPKGDPYDGPLNATKGAQGDNGTKGEMGPKGPVGPV
GDTGIKGNPGEEGSAGPRGEQGPKGEQGDQAKGNATLLKGEKGMMGSPGEPGEPGEVELV
GPRAEALKGAKGENGSAGEVGIKGLKGDNSSVPGQRGNRGPQGNKGNSGFPGIKGEMGIK
GEAGSGGEPGFKGEPGIAGDRGEAGPAGPMGLKGEDGNNGARGPLGDKGIGIPGERGGKG
QKGNAGPAGNRGEKGDNGDAGPPGDVGHSVFGPKGDVGAVGPEGERGPPGNPGFVGMTGP
MGPAGEDGPSGEKGEKGEQGEEKPGEQGMDGPKGVKGFQGVIGERGLPGAPAKPVFCPEI
GCPPGRPGRPGSPGPQGDPGLQGPQGNQGKKGQKGEKDECPKCAPGPKGMKGNQGIPGTP
GSNGTAGPNGTRGAQGSTGNSGSPGTDGEPGEKGAKGVQGPRGPDGEKGERPIGPRVELY
EPPGPKGDQGENGTKGLPGPQGTNGTRGEDGPPGEQGPNGTQGEGHKLCSFCCVFLSATG
VLKGSVGDVGQLDGPKGEEGDRGVNGSRGDTGAEGQQGVEGIPGRDLQGPAGMIGEEGAI
GVNGSRGQVGDTGDQGSEGPEGPKGEAGAPGDVGEPGESIPGPNGTNGEDGLKGSKVQGE
PGDPGPRGIAGVDGVAGSKGLPGPQGDDGPRGPPGSPGPQGQKGNIGDILCGQLNADYAF
LVDSSGSILEEEYRLLKRFVTQVIDFLLIGENLTHVGLIEYSSRASLQFNFTKSFDKQEI
KKTVEDLPQSFGLTRIDLALKIASQQLFTPEGGMRSLSRKVMVVLTDGNQTGTDKAPNQT
PLVDAVRPFKDMGVKVIAIGIGSVDREQLATLVSNADDILQPSSFQELLTLVQTTVGKSC
RGPPGEKGFEGPKGYTGDVGEKGLVGLPGEMGDQGPAGSQGPTGSPGDKGGVGNKGERGQ
QGPPGKATPGSKGPKGERGDRGLIGEPGLNGLKGLAGQQGDQGAAGGRGSKGNDGVQGET
GAEGEPGANGDKGIVGPPGIEGMVGMNGADGPQGPTGEKGVVGFPGTKGQQGDGGDVGVD
LRGEEGDPGEKGQQGMGGLRGFPGLSGDAGLRGPPGNTTPGEPGDPGAPGIKGAKGEAGP
SQLEGVALEAGPQGDPGRPGKIGMPGLEGDPGDVGEVGENGAKGPAGEPGM
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgaggctaaggacggcctcactactcgtcctacttttacaagtctacagaacagtcaat
tcccagggtcaaaatgatgcggaatgcaactgtaaacctggacaaaaaggttcaagggga
agaccaggtccagtgggaaaccgaggagtacaaggtacagagggtcctcctggacgagat
ggcttgagaggcttcaagggatataagggaaatgctggagtgcctggtggtgtcggtcca
caaggagataagggattagttggcgttcctggattcccaggtcttcatggaataccaggc
attccaggtattgctgggccaaaaggttttatgggactttgtggttgtgatggtgaaaag
ggagagcctggctttagtggcccatcaggtacaatgggtgtcgctggtgatcctgggcag
aaaggccgacaaggtccaaagggtgatccatatgatggtccacttaatgcaacaaaaggt
gctcagggtgataatggaacaaaaggagaaatgggaccaaagggcccagtcggacctgtt
ggtgacactggcatcaaaggaaatcctggagaagaaggatcagctggacccagaggtgaa
caaggccctaaaggagagcagggtgatcaagcaaaggggaatgctaccttattgaaagga
gagaaaggcatgatgggaagcccaggtgagccgggtgaaccaggagaagtggaacttgtt
ggccccagagcagaggctttgaaaggagcaaagggtgagaatggatctgctggtgaggtt
ggaataaaaggactgaagggtgataattcatctgtgcctggccaaagaggtaaccgaggg
ccacaaggaaataaaggaaattcaggttttcctggtataaagggtgaaatggggataaaa
ggagaggctggatctggtggagaacctggctttaagggtgaaccaggtatagcaggcgac
cgaggtgaagctggtccagccggcccaatgggattgaaaggtgaagatggaaacaacggt
gcaagaggtcctcttggagacaaagggattggaatacctggggaacgaggtggcaaagga
caaaaaggcaatgcagggccagctggaaacagaggggaaaagggggataatggtgatgca
ggacctcctggtgatgtgggacattctgtctttgggccgaagggagatgtgggtgctgtt
gggccagaaggtgaaagaggaccccctggcaatccagggtttgtaggtatgacaggccct
atgggaccagctggagaagatggacctagtggggagaaaggagagaaaggggagcagggt
gaggaaaagcctggagagcaaggaatggatggacccaaaggagtaaaaggattccaagga
gtaataggagagcgtggtctaccgggtgctccagcaaagccagtattttgtccagaaatt
ggatgcccaccaggaagacctggaagacctggcagccctggtccacagggagaccctggt
ctgcaaggtccacagggaaaccagggtaaaaaaggtcaaaaaggagagaaggatgagtgc
ccaaagtgtgctcctgggccaaagggtatgaaaggaaatcaaggaattcctggaacacct
ggcagtaatggtacagcaggaccaaacggaacaaggggtgcccaaggttccactggtaat
tctggctcacctggtactgatggcgaaccaggagagaagggtgctaagggcgttcagggg
cctcgtggacctgatggagagaaaggagaaagacctattggcccaagggtagaattgtat
gaacctcctggccccaaaggagaccaaggtgaaaatggcactaagggattgcctggccca
caaggtactaatggcacccgtggagaagatggacctcctggggaacaaggtcctaatggc
acccaaggagaagggcacaagctgtgttcattttgttgtgtttttctttcagccacggga
gtgcttaagggatcagttggtgacgttggacaacttgatggcccaaaaggggaagagggg
gacagaggtgttaatggctcaaggggggacactggtgcagagggacaacaaggagtggaa
ggaattccaggtcgagatttacaaggacctgctggcatgattggtgaagaaggtgctatt
ggtgtcaatggcagcaggggccaggttggtgatactggcgatcaaggtagcgagggtcct
gagggacctaaaggagaggcaggggctcctggagatgtgggagaacctggggaaagcata
cctggtcctaatggaacaaatggagaagatggtctcaaggggagtaaagtccaaggtgaa
cccggtgatccaggccccaggggaattgctggagtggatggagttgctggcagtaaaggc
ttacctggtcctcaaggagatgatggcccacgagggccaccaggatcccctggacctcaa
ggacaaaagggaaatattggagacatcctgtgtggccaactaaatgcggattatgccttt
cttgtggactcctcgggaagcattcttgaagaggaatatcgtctcttgaagcgttttgtc
actcaagtcatcgactttcttctaattggcgaaaatttgacccatgttggtctgattgaa
tacagcagcagagcaagcttgcaatttaatttcacaaaatccttcgacaagcaagaaatc
aagaagactgtggaggacttacctcaatcatttggcttgacgcggattgatttagctctc
aagattgcatcacaacagttatttacaccagaaggaggaatgagatccttatctaggaag
gtaatggtcgttttgactgacggcaaccaaaccggaacagacaaagcccctaatcagacc
cctctagtggacgctgttcggccattcaaggacatgggtgttaaagtgattgcgattggt
attggaagtgtggacagagaacaactggctacattagtctcaaacgccgatgatattcta
caaccaagctcttttcaagaacttctcactttagtgcagacaactgtcggcaaaagctgt
agaggtccgcctggtgaaaaaggctttgaaggtcctaaaggttacacaggagatgtcgga
gaaaaaggtttagtgggtctgccgggagaaatgggtgatcaaggacctgcgggatctcag
ggacccactggctctccaggagataagggaggagtcggtaataaaggagaaagaggccaa
caaggaccaccgggaaaagcaacaccaggatcgaaggggccaaaaggagaacgaggcgat
cgcggacttataggagaacctggtttaaacggtttgaaaggtcttgcgggacaacagggg
gatcaaggagcggctggtggacgggggagtaaagggaatgatggtgtccaaggtgaaaca
ggagctgaaggagaacctggtgccaacggagataaaggtattgttggccctccaggaatt
gaaggaatggttggtatgaatggagctgatggccctcaaggtcctactggtgaaaagggt
gtagttggtttccctggaacgaaaggacagcaaggcgatggtggtgatgttggagttgac
ttacgcggagaggaaggagatccaggtgaaaaaggacaacaaggaatgggcggcttaaga
ggttttcccggattatctggagatgctggtttgcgtgggccgcctggaaacaccacccct
ggggaacctggagatccaggtgcccctggaattaaaggagctaagggcgaagcaggccct
tctcagttggaaggtgtagcacttgaagcaggccctcaaggagaccctgggcgacctggt
aaaatcggtatgcctggactggaaggagatcctggcgatgtaggagaagtgggagagaat
ggggccaagggacccgcaggagaaccgggtatgtaa
DBGET
integrated database retrieval system