Acropora digitifera (stony coral): 107331231
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Entry
107331231 CDS
T04352
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03013
Nucleocytoplasmic transport
adf03015
mRNA surveillance pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107331231
09122 Translation
03013 Nucleocytoplasmic transport
107331231
03015 mRNA surveillance pathway
107331231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107331231
03041 Spliceosome [BR:
adf03041
]
107331231
03009 Ribosome biogenesis [BR:
adf03009
]
107331231
03012 Translation factors [BR:
adf03012
]
107331231
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107331231
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107331231
mRNA cycle factors
Stress granule specific factors
107331231
Spliceosome [BR:
adf03041
]
Complex C
Other components
EJC/TREX
107331231
Ribosome biogenesis [BR:
adf03009
]
Eukaryotic type
90S particles
Helicases
107331231
Translation factors [BR:
adf03012
]
Eukaryotic type
Initiation factors
eIF-4
107331231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
Cas3-like_C_2
AAA_22
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
107331231
NCBI-ProteinID:
XP_015751270
LinkDB
All DBs
Position
Un
AA seq
403 aa
AA seq
DB search
MSRKRKVVADEDEDLTKVDFETSEEVDVVPTFDQLKLREDLLRGVYAYGFEKPSAIQQRA
IKPIIKGRDVIAQAQSGTGKTATLSICVLQSIDIQTRETQALILSPTRELAQQIQKVILA
LGDYMSVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKLLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHDILEMTEKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLVEKMREANFTVSAMH
GDMPQKERDAIMKEFRSGQSRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVGDLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaaaggaaggttgttgctgatgaggatgaagatctaactaaggtcgatttc
gaaacatcagaagaagttgatgttgttccaacgtttgaccagcttaaactccgggaggac
ttgcttcgaggcgtttatgcttacggttttgagaaaccatctgcgatacaacagcgtgca
attaaaccgattatcaaaggaagggacgtaattgcacaagcccagtctggaacaggaaaa
acagctacactttcaatatgtgtgttgcagtctattgatatccagacaagggagactcaa
gctttgatattatctccaacacgtgaacttgctcagcagattcaaaaggttatccttgcc
ttgggtgattatatgagtgttcaatgtcatgcctgtatcggaggaacaaatattggtgag
gacatcaggaaactggattatggacagcatgttgtgtctggtactcctggaagagttttt
gatatgatcagaaggcgtaacttaaggacccgctccattaagctgctggttttggatgag
gcagatgaaatgttgaacaaaggtttcaaggagcaaatctatgatgtttacagatatctg
cctccggcaactcaggttgttctgctaagtgcaacactcccacatgacattttggaaatg
actgagaagtttatgacggatcctatcagaattctggtgaaacgtgatgaattgacgttg
gagggcattaaacagttctttgtggctgttgaacgtgaggagtggaagtttgacactctt
tgtgatttgtatgatacgctcaccattacacaggcagtcattttctgtaacacaaaaaga
aaggtggattggcttgtagagaaaatgagggaggccaacttcacggtgtcagccatgcat
ggcgacatgcctcagaaagaaagggacgccatcatgaaagagtttaggtctggacaaagt
cgtgtcctaatttcaacagatgtgtgggcaaggggcattgatgtacagcaagtctcactg
gtgatcaactatgacctgccaaacaatcgtgaattgtacattcacaggattggtagatca
ggtcggtttggtcgcaagggtgttgcaattaactttgtcaagtccgatgatatcagaatc
ctgcgagatattgaacagtattacagtacacagattgacgaaatgcccatgaatgttggt
gaccttatctaa
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integrated database retrieval system
