Acropora digitifera (stony coral): 107331460
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Entry
107331460 CDS
T04352
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107331460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adf03041
]
107331460
Spliceosome [BR:
adf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107331460
Complex C
U5 SnRNP specific factors
107331460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
TPR_14
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
TPR_2
TPR_16
CFAP70_TPR_C
TPR_8
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_1
TPR_6
TPR_CcmH_CycH
PRP1_N
ARM_TT21_2nd
TPR_11
NatA_aux_su
ARM_TT21_4th
FAT
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
107331460
NCBI-ProteinID:
XP_015751536
LinkDB
All DBs
Position
Un
AA seq
762 aa
AA seq
DB search
MCQTVELYNYAVVAMRVIATGFTTRSDIGPARDATDISDERHGKPGFANEKKAQNEDDEE
EDLNESNYDEASDSVSGQTVVDPKGYLTDLQSLTPSAGGDIGDIKKARLLLKSVITTNPQ
HGPGWIAAARLEEVTGRMQAARNTIMKGTEVCSKNEDVWLEAIRLQPPESANAVCAQAVG
QLPLSVRLWIKAAALEDEMKAKKRVYRKARENIPTDRQIWITAAKLEEANDNLPMVEKSI
ERCPSSIDFRLWLALARLETYENARKVLNKARENIPTDRQIWITAAKLEEANDNLPMVEK
IIDRAVTSLRANGVEINRDQWIKDAEESEKADSVVTCRAIINTVIGVGVEEEDRKHTWME
DANSCVANNAFECARAIYAHALSVFPSKKSVWLRAAHFEKNHGTRESLESLLQNAVKHCP
KAEVLWLMGAKSKWLAGEIYDARSILALAFQANPNSEEIWLAAVKLESENNEDQRARKLL
QRARLNACTPRVMMKSIKLEWVLRNLSEVTPFFFSFQFCVSHSIPDFAKLWMMMGQIHQE
QNHIDSAREAYKQGTKKCTRSIPIWLLLARLEENAGQTTKARSVLEQARQRNPKCPELWL
EAVRIETRGGRKDFARTLMAKAMQECPTSGILWAEAIFMESRPQRKTKSVDALKRCEHDC
HVLLAVARLFWSERKINKAREWFNRAVKLDPDLGDSWAYFYKFELQHGTEAQQESIMQRC
VMAEPHHGENWCAVSKATPNWRLRTKDILPIVAKFLKPVEKE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagacagtggaactgtataattatgcagtggttgccatgcgtgttattgctacc
ggtttcacgacgcgatctgacattggtcccgcaagagatgctactgatatcagtgatgag
cggcatggaaaaccaggatttgctaatgaaaagaaagcacagaatgaagatgacgaagaa
gaagatttgaatgagtcaaattatgatgaggcttcagattctgttagtggtcagacagtt
gtggatcctaaaggttatttgactgatctacaaagtttaacaccctctgctgggggtgat
atcggcgatattaagaaggcacggcttctccttaagtcagttatcaccacgaaccctcaa
catggaccgggttggatagcggctgctcgacttgaagaggtgacaggtcgcatgcaagcg
gcgcgaaatacgatcatgaaaggaacggaagtttgttcaaagaatgaggatgtctggctt
gaagctattcgattgcagcctccagagtccgcgaacgcagtttgcgcgcaagccgttggt
cagcttccattatctgtgcgactgtggatcaaagcagcggcgctggaggacgaaatgaaa
gccaagaaacgagtttacagaaaagcacgcgaaaatatcccgactgatcggcaaatctgg
ataacagcagccaaactggaagaagcgaacgacaacctccctatggtggaaaaatctatc
gaacgatgtcccagctccatagatttcagactctggctcgctcttgctcgactggaaact
tacgaaaatgcgagaaaggttttgaacaaagcacgcgaaaatatcccgactgatcggcaa
atctggataacagcagccaaactggaagaagcgaacgacaacctccctatggtggaaaaa
atcattgacagagctgtgacttctttaagggcaaacggcgtggaaatcaacagggatcag
tggattaaggatgccgaagagagcgagaaagctgacagcgtagtgacatgcagagctatt
atcaacactgtaatcggcgttggagtggaagaagaagacagaaaacacacgtggatggaa
gatgctaacagctgtgttgcaaacaacgcattcgagtgtgcaagagctatctacgcgcat
gctctgtccgtgttccccagcaagaaaagtgtttggctgcgagctgcacacttcgaaaag
aatcatgggacgagagagtctttagagtctctgctacaaaatgcagtcaagcactgtccg
aaagcggaagttttgtggctgatgggtgcaaaatccaagtggttggctggggagatttat
gacgctcgttccatcttggccttggcgtttcaagccaatcccaacagtgaagaaatctgg
ctggctgccgtgaaacttgagagtgaaaataatgaagatcagcgagcaagaaagcttctc
cagagggcaagactcaacgcctgcactccaagggtgatgatgaagtcgatcaagctagaa
tgggttttaaggaacctttcagaggtaactccattttttttttcttttcaattctgtgtg
agtcattctatacccgatttcgcaaagctctggatgatgatgggccaaatacaccaagaa
cagaatcacatagacagcgctcgagaagcttacaagcaagggacaaaaaaatgtactcgt
tccattcccatttggttattactcgcaaggctcgaagagaacgcagggcagacaactaaa
gcgagatccgtattggagcaagctcgtcaaagaaatccgaagtgtcccgaactatggcta
gaggcagttcggatagaaaccagaggcggacgcaaggatttcgcgcgaactttaatggct
aaagcgatgcaggagtgtccaacctctggaattttatgggcagaagccatttttatggaa
agcaggcctcagcgaaagacgaaaagcgtcgatgcacttaagagatgcgagcatgattgt
catgtgttgttagcggtggcaagattgttctggagcgaaaggaaaataaacaaagcgagg
gaatggtttaacagagctgttaaactcgacccagatcttggcgattcatgggcttatttc
tacaagttcgagcttcaacatggaaccgaggcccaacaagaaagtatcatgcaacggtgc
gtgatggccgagccacatcacggggagaactggtgcgcagtgtccaaggctacaccgaac
tggaggcttcgaacaaaggatatacttcctatcgttgccaagtttttaaagcctgtggaa
aaggagtag
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