Acropora digitifera (stony coral): 107331510
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Entry
107331510 CDS
T04352
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03015
mRNA surveillance pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107331510
09123 Folding, sorting and degradation
03018 RNA degradation
107331510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107331510
03041 Spliceosome [BR:
adf03041
]
107331510
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107331510
mRNA cycle factors
Stress granule specific factors
107331510
Spliceosome [BR:
adf03041
]
Complex C
Other components
Complex C specific factors
107331510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_5
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
107331510
NCBI-ProteinID:
XP_015751591
LinkDB
All DBs
Position
Un
AA seq
635 aa
AA seq
DB search
MNPAPGAPNYPIASLYVGDLAADVTEAMLFEKFSTVGAVLSIRVCRDIVTRRSLGYAYVN
FQQPAAAERALDTMNFDPIKGRPCRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDT
FSAFGNILSCKIAQAEDGTSKGYGFVHFDTEEAAEDAIAKVNGMLLNDKKVYATKWMSRR
ERLEKLGNQPKKFTNVYIKNFGEDMDDERLKELAEKFGHVLSLKVVIGESGRSKGFGFVS
YETPEQAQQAVDDLCGKEWNGQKLYAARAQKRXERQMDLKSQFEKKKSERISRYQGVNLY
VKNLDDTIDDGRLREEFSAYGTITSAKVMMDDKDNSKGFGFVCFSSPEEATKAVTEMNGR
ILVSKPLYVALAQRKEERKAQLAAQHMQRIAGLRMQQAAGQPVGQVFPQAGAFYMQPLAQ
AGQRPFFSPQMQQVRPRWQPMQPQQQQVRPSGMQGIPGGGQVPRARGMRQVPPRGVPGQQ
AQSTGPGGAGQRLGMGQPPQVRGGPGGMQAQRPSYKFGQNVRNQPQGHPGTVGMQSQDPV
QQSIHIPGQEPLNSRELAAASPQEQKQIIGERLYPLIQSTHPDQAGKITGMLLEIDNAEL
LHMLESREALAAKTQEAVSVLRAHSAKEKSEEIKN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgctcctggcgctccaaactatccaattgcttctctgtacgttggtgattta
gcggcggatgtcactgaggctatgctgttcgagaaatttagtacagttggtgcggttttg
tcgatcagagtgtgccgcgatattgtgactcggcgttcgttgggttacgcttacgtaaat
tttcagcaaccggctgctgccgaacgagctctcgacaccatgaatttcgatccgatcaag
ggaagaccttgccgaatcatgtggtctcagcgagacccttctcttcgaaagtctggcgtg
ggtaacattttcatcaagaatctcgataaaagcatcgacaataaagcgttatacgacacc
tttagtgccttcgggaatatcctgtcttgtaagattgctcaagcagaggacggtacgtcc
aaaggatacggctttgttcacttcgacaccgaggaagccgcggaagatgctattgcaaaa
gtgaacggcatgttgctgaacgacaagaaagtttatgctaccaaatggatgtctcgaagg
gagcggttggaaaagctgggtaatcaacccaagaagttcaccaatgtctacatcaagaac
tttggtgaggacatggacgacgaacgactcaaggagcttgctgaaaagtttggacatgtt
ctaagtctgaaagtagtgattggtgagtctggtcgctccaaagggtttggatttgtctcc
tatgaaacacctgaacaagctcaacaggcagtggatgatctgtgtggaaaggaatggaat
ggtcagaagctgtatgctgcaagggctcagaaaaggnctgagagacagatggatctcaag
tcccagtttgagaagaaaaagagtgagcgcatcagtcgttaccaaggtgtcaacttgtac
gtcaagaacttggacgacaccattgatgatggccgtcttagagaggagtttagtgcatat
ggtaccatcactagtgccaaggtcatgatggatgacaaggataattccaaagggtttggt
tttgtttgtttttcatcacctgaagaagccaccaaagcagtcactgaaatgaatggcagg
attttagtgtccaagccactttatgttgccctggcacagcgtaaagaagaacgcaaagca
caacttgcagcccagcacatgcagcgcatagctggcttgagaatgcaacaggcggccggc
caaccagttggacaggtgttccctcaagcaggagcattctacatgcagccattagcccag
gctgggcagcgaccattcttctcacctcagatgcagcaagtgcgcccccgctggcagccc
atgcaacctcaacaacaacaagtacgtccctcaggaatgcaaggtattccaggaggaggg
caagtgccacgtgcaaggggcatgcgtcaggtgcctcccagaggtgtacctggtcagcag
gcgcaatcaactgggccaggaggtgccggccagcgcctcggcatgggacaaccacctcag
gtgcgaggaggacctggaggaatgcaagctcaaaggccttcctataaatttggacagaat
gtaaggaatcagccgcaaggacatcctggaactgttggaatgcagtctcaagatccagta
caacaatccattcatataccaggacaggaaccccttaactccagggagttggcagcagca
tctcctcaagaacagaagcagatcattggagagcgcctgtaccccttgattcagtcaaca
cacccagatcaggctggtaagatcacgggcatgctgttagagattgacaatgctgagctg
ttgcacatgttggagtcccgtgaggctcttgctgccaagactcaggaggcggtgtctgta
ttgcgtgcccacagtgccaaggagaagagtgaggagataaagaattga
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integrated database retrieval system
