Acropora digitifera (stony coral): 107331772
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Entry
107331772 CDS
T04352
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107331772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107331772
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107331772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
Motif
Other DBs
NCBI-GeneID:
107331772
NCBI-ProteinID:
XP_015751885
LinkDB
All DBs
Position
Un
AA seq
898 aa
AA seq
DB search
MLPVYVSKMADHEEQTNVAGNEALPGIGELSSFSQDSLGAIVEAIKSCGNLPAAGEDHDL
YYSFSDFREFRAAQGARLLSNIGNLLHHWKVRCHWPSDSFNIDPEGDELLDSLVEANDTI
LECVDTSLDEAAGLNKSNKTANVTIAGAPGQQGTPLVSSWNRHKNYATGKTENTYRFLMA
KNIQRPQLKFKDSIDNSNTPFIPIIKSKPNALKPLQTTTSIESKGVPSAIADLVHQARMK
AFEGGPLLNSTAHPYQYELEVFEPPEDQMKLCKEQLYEELEKTPCTFVETQQQLEELSEN
LSAVSEFAVDLEAHSYRSFQGFCCLMQISTRDHDYLIDVLELRTELHILNDSFTNPRILK
VFHGADMDIGWLQRDFGIYVVNMFDTGQAARVLNYGKYSLAFLLKKFCDVTANKQYQLAD
WRIRPLPQEMVHYAREDTHYLLYISDRLHNELLKSGNANNNLLQSVYSKSKNVCLKRYEK
PLFTSESFQRVLEKHKKAFNTEQIDEKRATRAKFVQSRPALYFSQHFSLTRNKCFCCVTS
WGFYLSYFATRIVVENVCFCVCVCVLKLRRYLFLIMFLLLLLRDPQGVLACCNPVPTLVK
QYVNEIHQLIMQAKELALNTNKGLTGVSSQVDARSTSNQKESTQQRLSQQSLVVGDQKSN
NLLLNGNTPFVSARPSPVGPILASGPPVHTKAKPAVSIFEICHETQLTDGQKKAAKIKAS
FGNPFQKFLPLKTPSATTEGSSVTDEPQGREEPDVRNGSNSSVEETGTLETNAGTKRKVS
DDEETPEDLTPLRNKNAAKKPSRKKKRESVEEGSSTSNIHEKEGSATLNPFDYSEADYST
FSDHRQNGSADKPIVFNPYRNAKKSKGPRSKVHMNSGQKNFTFSSTKGSDHKQKLPRR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgttaccagtctatgtttccaagatggctgaccacgaggaacaaacaaacgttgctggc
aatgaggctttgcctggaataggagaattaagcagcttttctcaggattctcttggtgcc
attgttgaagccatcaagtcatgtggtaacctgccagctgcaggcgaggatcatgattta
tactacagcttttcagacttccgagaatttagagcagcccagggagcaagacttcttagc
aacattggtaatctattacatcattggaaagtgcgctgtcactggccaagcgacagtttc
aacatagatcctgagggtgatgagttgctagacagtcttgtggaagccaatgacaccatc
cttgagtgtgtggacacaagccttgacgaggctgcaggcctcaataaatcaaacaaaaca
gcaaatgtgacaatagctggtgcacctgggcaacaaggaacacctcttgtgtccagctgg
aataggcacaagaactatgccactggtaaaacggagaatacatatcgttttctgatggcc
aaaaacatacaaagaccccagctgaagttcaaagatagtattgacaacagtaatactccc
tttattccaatcataaaaagcaagcccaatgcactaaaacctctgcaaaccacaacaagc
attgaatcaaaaggtgtgccatcagctatagctgaccttgtccatcaagccagaatgaaa
gcatttgagggtggacctttactcaacagcacagcccatccctatcagtatgaactggaa
gtctttgagccaccagaggatcagatgaagctgtgcaaagagcaactttatgaagaattg
gagaagactccatgcacctttgtggaaacacaacaacagctggaagaactgagcgaaaac
ctgtctgctgtcagtgaatttgctgttgacttggaggctcattcatatcggtctttccaa
ggattctgttgcttgatgcagatatcgacaagagatcatgattatcttattgatgtcttg
gagctacgaactgaacttcatatccttaatgattcctttaccaatccccgtatactcaag
gtttttcatggagcagacatggatattggttggctacaacgagactttggtatttatgtc
gtgaacatgtttgacactggccaggctgctcgagtgctaaactatgggaagtactcattg
gcattcctgctgaagaagttctgtgatgtcactgcaaataaacagtatcagttggctgac
tggagaatacgacctctgccacaggagatggttcattatgcaagggaggatacacattac
ttgctgtacatttctgatcgtttgcacaatgagcttcttaagagcggcaatgcaaacaac
aatttgctacagtctgtttactccaaaagtaaaaatgtgtgcttgaagcggtatgagaag
ccattatttaccagtgaatcgtttcaacgagtattggagaaacataaaaaggcatttaac
acagaacagattgatgaaaaacgagcaacaagggcaaaatttgttcaaagtagacccgcg
ctctacttttcgcaacatttttctttaacccgcaacaaatgcttttgttgcgtgacaagt
tgggggttttatttatcgtatttcgccacccgtattgtcgttgaaaatgtttgtttttgt
gtgtgtgtgtgtgtgttgaaattgagacggtacttattcttaatcatgtttctgttgttg
cttcttagggatccccaaggggtgttagcgtgttgtaatccagtcccaacacttgtcaag
cagtatgtcaacgagatccaccagttgattatgcaagcaaaggaacttgctctcaataca
aacaagggcttaactggagtgtcgtcacaagttgatgcacggagcacatcaaaccagaaa
gaatcgactcaacaaaggttgtcacagcagtctttggttgttggtgatcagaaatctaat
aatttactactaaatggtaatacaccgtttgtatccgcaaggccaagtccagtgggtccg
attttagcgtcaggtcctcctgttcatacaaaagcgaaaccggctgtgtcgatctttgag
atctgccacgaaacacagctgactgatgggcaaaagaaagcagcgaaaataaaggcgtcc
tttgggaatccatttcaaaagtttcttcctctgaagactccgtcagcgacaacagaaggt
agctcagtcactgatgagccgcagggtcgtgaagaacctgatgtgagaaatggaagtaac
agctcggtagaagaaacaggcactttggaaacaaatgctggcacgaaacgtaaagtatct
gatgatgaagagacgccagaagatttgacgccattgagaaataagaacgcggctaaaaaa
ccctcacggaagaaaaagcgcgaatccgttgaagaaggttcatccacttcaaacatccat
gagaaagaaggctcagcgaccctgaatccgttcgactactccgaagcagattattcaaca
ttttcggatcacagacagaatggtagcgcagacaagccaatagtgttcaatccttacaga
aacgccaaaaaatcaaagggacctcgttctaaagtacacatgaattctggacaaaagaat
ttcacgttttcttcaaccaaaggatctgaccacaaacagaaattgccccgtcgatga
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