Acropora digitifera (stony coral): 107331892
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Entry
107331892 CDS
T04352
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107331892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107331892
03400 DNA repair and recombination proteins [BR:
adf03400
]
107331892
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107331892
Messenger RNA biogenesis [BR:
adf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
107331892
DNA repair and recombination proteins [BR:
adf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
107331892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
107331892
NCBI-ProteinID:
XP_015752036
LinkDB
All DBs
Position
Un
AA seq
641 aa
AA seq
DB search
MLEHVNMSAKATDSRPSWEVFLQCVRTVSTVFVISELTDHQSQALYCFVSGEDVFVNLPT
GYGKSLIFHMAPLVHTWMHQNVSPDLWAKEPILLVISPLLALMQDQVKKLTSVGLKAAYV
GAEQEPGTLRDIEEGKYSFVFISPESTLSTERWRNVLLSDKYQRDVIGVAVDEVHCIAEW
GTSTSNKNRSSFRAWYSRLNEIRSLLEVPFIALTATATVKTKEQIYELLEFGSPKEIVES
PNKFNVRYSVQKLENSLSIVENFRCLINELLNKGKESVRTIIYCQTIKQCSHIFRMFELE
LGPSFFWGERNPRNRLVEMMHSGSPVSVKDHVLSQFSDDSTCLRVLIATIAYGMGVNCKG
VKRVIHFGPSKTIQAYMQESGRCGRNGEQSDALLLYNGITIKAADSAMKSYVKSVRCRRN
FLLEQFGVPVSQSDFPAGHMCCDNCADSCKCQGGYCNIDLHLPTLQDDTDAGHSREISCE
QMSKLKDSLKVLRRQIVRNTSDALEQNGASLSGCGTKLLEFGTEQVQQVIQNANHIFSLA
DLNKHVDIWQKKHANSVMTIFQSIFNDVKEPVNCTSEEDSYFEDNGDEWVKLMDDQSFME
LLDLSEWDVESSIEDESISDMHDDSAYPEFLDSVICNLNID
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacatgtaaacatgtcggcgaaagcgacagattcgcgtccttcttgggaagtt
ttcttgcagtgtgttcgaactgtaagcacggtgtttgttatttcggaattaacagatcac
cagagtcaagcgctgtattgtttcgttagcggtgaggatgtgtttgtgaaccttccaacg
ggatatggaaagtctttgatttttcacatggctccccttgtgcacacgtggatgcatcag
aatgtatcgccagatttgtgggcaaaggagccgatattgctcgtaatttctcctctgtta
gctttaatgcaagaccaagtgaaaaaactaacatctgtcggactgaaggcggcttatgtt
ggtgcggaacaagagccaggaactcttcgagatatcgaagaagggaagtattctttcgta
tttatttctccagaatctactctttcgaccgagaggtggcgaaatgttcttctcagcgac
aagtaccagagagatgtaattggagtagccgtcgatgaagtacattgtatcgccgagtgg
ggcacatcgaccagcaacaaaaatcgttcttcatttcgtgcatggtattcacgactgaac
gagatccggtctcttttggaagtaccattcattgctctcacagctacggcgacagtgaaa
accaaggaacaaatttatgaacttttggagtttggatcaccaaaggaaattgtagaaagt
cccaataagtttaacgtacgatactccgttcagaaactcgaaaattccttatcaatcgtt
gagaattttcgttgtttgatcaatgaactgctaaacaagggtaaagagagtgtcagaacg
attatttactgtcaaacaataaaacaatgttcgcatatattcagaatgtttgaattagag
cttggtccttcttttttctggggagaaagaaacccccgaaacagactagttgaaatgatg
cactctggtagcccagttagtgtcaaagatcatgtccttagccagtttagtgatgactcc
acttgccttcgtgttctaatagctacaattgcctatggaatgggtgtcaattgcaagggt
gtgaaacgagttattcactttggtccatccaaaactattcaagcttacatgcaagagagt
ggacgatgtgggcgcaatggagagcaaagtgatgccctgctgttgtacaatggcattaca
atcaaggcagcagattctgccatgaagagctatgtaaaatcagtaaggtgtcgcagaaac
tttctgcttgaacagtttggtgtgccagtttctcagtcagattttccagctggtcacatg
tgctgtgacaactgtgctgattcctgcaaatgtcaaggtggctactgcaatattgatttg
catctacccacattacaggatgacacagacgcagggcactcgagggaaatctcatgcgag
cagatgtcaaagctaaaagacagcctgaaagtcttgagacggcaaattgtgagaaacacc
agtgacgcacttgaacaaaacggtgcgtcacttagtggttgtggcacaaaacttttggaa
tttggaacagagcaagttcaacaagttattcaaaatgcaaatcacattttctccttagct
gatctcaataaacacgttgacatttggcagaaaaagcatgctaattcagttatgacaatt
tttcagtcaatctttaatgatgttaaggagccagtgaactgtacaagtgaagaagatagt
tattttgaggataatggtgatgaatgggtcaaactaatggacgatcagtcattcatggaa
ttacttgacctgtcagaatgggatgttgaatcatcaattgaagatgaaagtatcagtgat
atgcatgatgattctgcctatcctgagttcttggacagtgttatttgtaacctgaatatc
gattaa
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integrated database retrieval system
