Acropora digitifera (stony coral): 107332518
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Entry
107332518 CDS
T04352
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04140
Autophagy - animal
adf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107332518
04148 Efferocytosis
107332518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
adf04131
]
107332518
Membrane trafficking [BR:
adf04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107332518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
zf-Vps39_C
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
107332518
NCBI-ProteinID:
XP_015752744
LinkDB
All DBs
Position
Un
AA seq
452 aa
AA seq
DB search
MHDAFEHAVVIEKLPLHIECIATFGDNLLVGTRQGHLLLYRVREGSWDKGFEVELQSSNK
LFSKKPILQLAVVDQLNLLISLSDSVISVHNLETFALLFTLHKTKGATVFAVNIKERKQS
SVFDPSPVLELQLCVSVKRKLQLFRWKHGEFQELEDFLLPDVCRSVVWSKESLCVGFKRE
YSLIKTSTGAQTELFSTGRHLEPTIATLPSGELILCRDDISIITDSEGRKTQKQTLTWSD
TPTALVNSSQYDKIPRMKLENGRNHTTFYILMNQYCQRNFSEDREGSKDVYVSLLRMYLE
PSGEEGKDFKPNVAVALNLLQEHRQKIAIAKALELLPPSIEVREVYAFLLSVLEDKEKKR
KHSQVLKGLLFAEHLQIQEQRMHYQARKILLTDERACRVCHKKIGNSAFVYYPTGEILHY
YCRKNMTSPPSSEHNTPRHSPTPEDNLIQGRY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatgcgtttgaacacgcagttgttatagagaaactccctctgcatatagagtgt
atcgcaacgtttggtgacaatcttcttgttggaacaagacagggtcatttgctgctgtat
cgtgtgagagaaggttcgtgggacaagggatttgaagtggaactccaaagttccaacaaa
ttgttttctaagaagccaattctgcagctagcagtagtggatcaactaaatttgctgatt
agtctatcagattctgtgataagtgtgcataacttagagacatttgctctcctgtttact
cttcataaaacaaaaggagcaacagttttcgctgtaaatattaaggagaggaaacagtca
tctgtatttgatccatctccagttcttgaacttcagttatgtgtttcagtgaagaggaag
ctacagctgttcaggtggaagcatggagaatttcaggagttggaggactttctcttgcca
gatgtatgcagatcagtggtttggtccaaagaatctctttgtgttggttttaagagagaa
tactcacttatcaagacaagcacaggagcgcaaacagaattattctcaactggaagacac
ctggagccaaccattgctactttaccaagtggggagctgattttgtgtcgtgatgacatt
agtattattaccgatagtgaaggaaggaaaacacagaaacaaacattgacttggtcagac
actccaacagccttagtgaacagcagtcaatatgacaagataccaagaatgaaacttgaa
aatggacgaaaccataccacattttacatcctaatgaaccagtactgtcaacgaaatttt
agcgaagacagagaggggagcaaggatgtttatgtgtctttattacgcatgtacctggag
ccttcaggcgaagaaggaaaggacttcaagcccaacgtcgccgtagcgttaaatcttctt
caagagcatcgtcagaagattgccatcgctaaggcccttgagctgcttcctccttctatc
gaggtacgcgaagtttacgcctttctactcagtgttctcgaggacaaggagaaaaaaagg
aaacactctcaagtgctaaagggtcttttgtttgcagaacatctccagattcaagagcaa
cgtatgcattatcaggctcgaaaaattcttctgaccgacgaaagggcgtgtcgagtttgt
cacaagaaaattggtaacagtgcctttgtgtattacccaacgggagaaatacttcattac
tactgccgcaaaaatatgacctcgccccctagcagtgagcacaacacgcctcgacacagc
cccactccggaagacaacctgatacaaggacgctactga
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