Acropora digitifera (stony coral): 107333624
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Entry
107333624 CDS
T04352
Name
(RefSeq) sodium channel protein 1 brain-like
KO
K21862
voltage-gated cation channel
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
adf02000
]
107333624
Transporters [BR:
adf02000
]
Other transporters
Pores ion channels [TC:
1
]
107333624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
107333624
NCBI-ProteinID:
XP_015753939
LinkDB
All DBs
Position
Un
AA seq
1802 aa
AA seq
DB search
MVRFAPVISSAAVARSQASNLQGARVASTGEFSVTASGQQKRQQAKLPSLYPAISLKSLR
SRELVSKIDRDTPEVSGHNTVGSDTVEWRVNASQQSAEPKVKGTSLVVGSAGILRAATAV
AVNNATAKITVHQAEEQIQEPECETFLILSTRFGRQYVFRFSKEKSLFLFGPLNVVRKAI
IILITNQFFELFILLTIIVNCIFLALKNAPEEPELLKLKCFCFCCMTLSLCLCHISGLKT
MVNALLKSMLMLSDVLILTLFFLCIFALVGLQLFVGQLKNKCISNDNMWLRSDNNSDDGQ
PRVCGNASTARHCPVNYTCVSTGENPNYGYTNFDNFAWSLLTAFQLVTMDFWENVFNYVL
ASMGSWYVFYFVFVVFFGSFYLINLVLAVVAVSYQQEVVAIQEKDNEYEDLKAVMSPYLF
HGKATPKLLVQDGRLKPEALVTKCKLSLCIPCLKRTSCSEVPETKLSSANGSHVSLGNSQ
SGLGTTSEECSSASPNANNASRALRNKTNVTGTKLASINSSPNHKQQQRQRSSTSSNDEI
IRMPQTATNSKCLDVKKSWPRPLSVISEAESLHSDNQCTVERECNANREIAFNGTATRIS
TAGSSVASVGSLGRPNSQEMMAKDNKEELARRKGIRQRISRLTIDPLFELSITFCILLNT
LFLSLEYHGMNIDFKLALDIGNMVFTFVFFMEMVLKLVAFGPRGYVKTRWNIFDGFIVVI
SIVDLILVLAKIGGGAGLSVLRTFRLLRVFKLAQSWQTMNMLLRTIASSIGQLGNLTLVL
GIIVYMLAVVGMQIFGSSYTQEKFGEDIPRWNFNDFGQACMMIFRILCGEWIEPLYDSMR
ATSPASFLFFLTALVIGNFLVLNLFLALLLNAFARESLQGEAEKRKEARPSKFYKGVQRL
SKVLRIGRIFPRRGTQVKPQATETHSSTHDESVKDGKDVLHGSTALLNAVTAFQKKGTLN
RDTMKRLSIVIEAANKDSNASSTVLNLARTSAPITSPRSSVQADQPAKQTDAELAMTEVQ
ECCPCWMKFCTCNCIAKWKESSRYRAWRNMRHNIKKFVEHRYFDWVILLIIISSSVTLVF
EDVHLDSRPTLKEVLNYLNIVFAVVFTLEFLLKTLGLGLLEYFKNLWNCLDVIIVAISLL
TAVESMEELTSTTSASLTNQTIEESDSSLSSFRSLRTLRALRPLRAISRWEGMKVVVNSL
LFAIPGIGNVLLVCMVFWLIFSIVGVQFFGGKFFRCVNSRGERLSVDSVTNKTECIRLSY
RWVNANINFDNVLNGLIALFQVATFEGWMEVMRDAVDARQIDEQPESNHSFTPYLYFVIF
IIVGSFFTLNLFIGVIIDNFNRLKKQVKQLSFRRNVLVKWQAGLFDIIHSSKFETFIMIL
ICLNMLVMMIQHHEQRPEVDLIMNVINLVFTAIFTLEAIVRIVAQRLHYFTKPWNIFDFT
IVILSIVGIVLEYLHYNLFVTPSLFRVARVFRIGRLLRFYKGARGIRRLLFALVISLPAL
FNIGALLFLVMFIYAIIGMSSFGYVKKTGALNDVVNFETFGNSMLLLFRLSTSAGWNDVL
EPLLIQPPDCDEHHRRQPNGDCGTPWLAIVYFISFILLTFLIIINMYIAIILENLSQAHE
QDEVGITEDDLEMFYSLWEQYDPQATQYIFHSQLSDFVDNLEPPLRIPQPNKFACIHLNI
PIKKGERIHCFDVMQALVRRVIGTIEEDGSVAFALMKSRMEHHFVRAFPKRAKTKTESTT
LKRTQEIRAATIIQRSYRQYRFQLELRKFRLQKSLKPVENDAHSTIGDEFHRSGPMQGNH
RA
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggtttgcaccggtaatatcaagcgccgctgtagcgcgatctcaagcgagtaat
cttcaaggggcgagggtcgcgtcgactggagagttctccgtcactgcatcaggacagcag
aaaagacaacaagcaaaattaccttctctttaccctgccatatcgcttaaatcgttacgt
tcgcgagaactagtgtcgaaaatcgatcgtgatacccctgaagtgagtggtcataatact
gtgggtagtgatacggtggaatggcgcgttaatgcgagtcagcaaagtgcggaacccaaa
gtgaagggcacgtccttggtagttggttccgctggcattttgagggccgctacagctgtt
gctgtgaataatgccacagccaaaataacagttcaccaagcagaggaacaaatacaagaa
ccggaatgtgagacatttttaatcttgtctacccgctttggcaggcaatacgtcttcaga
tttagcaaggagaaatcattatttttatttgggccactaaatgttgtgaggaaagcaata
attattcttatcacaaatcaattttttgaattatttatacttctcactataatcgtaaat
tgcatatttcttgctttgaagaatgcgccagaagaaccagagttgcttaaactgaaatgt
ttttgcttttgttgcatgacgttgtcattatgtttgtgtcatatttcaggtttaaagacg
atggttaatgccctgctcaagtccatgctgatgttatccgatgtactgattttgacgtta
tttttcctgtgtatcttcgctttggttggactgcagctttttgtaggacagttaaaaaat
aaatgcatctccaatgacaatatgtggctgagaagtgataataatagtgatgacgggcaa
ccgcgtgtttgtggaaacgcttcaacagctcgtcattgccctgtaaactatacctgtgtg
tcgactggtgaaaacccaaattatggttacaccaactttgacaactttgcttggtctctt
ttaactgcttttcaattggtaactatggacttttgggagaacgttttcaactacgttctt
gcctccatgggttcgtggtatgtgttttatttcgtgttcgtggttttctttggctctttt
tatctcattaatctggtgcttgcggtggttgctgtctcttatcaacaagaagtagtggca
atacaagaaaaggacaacgagtatgaagaccttaaagcggtgatgtctccttatttgttc
catggaaaagcgacacctaagcttcttgtccaagatgggagactaaaacccgaagctttg
gtaacaaagtgtaaactctctctctgcattccttgtttgaaaagaacttcgtgctcagaa
gttcctgaaacaaaacttagctctgcgaacggcagtcacgtgtcattagggaattcacag
agtggattgggcaccacgtctgaggagtgttcttcagcgtctcccaacgctaacaatgcc
agcagagcattaagaaataaaacaaatgttaccggaacaaagttggcctcaattaattct
tcgccaaatcacaaacaacagcagcgacagagaagtagcacttcttctaacgatgaaatt
ataaggatgccacaaactgcgacaaattccaaatgtttagacgtaaagaagtcttggcca
agacctttaagtgtaataagcgaagctgaatccttacacagcgataatcaatgtacggtt
gaaagggaatgcaacgcaaacagagagatagcatttaatgggacggccactagaatatca
accgcgggatcttccgtagcatccgtgggatctttagggcggccgaactcgcaggagatg
atggctaaagacaataaggaggaattagcaagacggaaaggaattcgacaaaggatttct
cggctgacaatagatccattgttcgaactgtctattacgttttgcattcttttgaacacc
ctatttttgtccttggaataccatggaatgaacattgatttcaaattggccctagatatt
gggaatatggttttcacattcgtattcttcatggagatggtattgaagctcgtcgcattc
ggtcctcgtggttatgtcaagactcgttggaatatatttgatggattcattgtagtaata
agtattgtcgatctaattcttgtactcgcaaagattggcggcggcgcaggtctcagtgtt
ctaaggacgtttcgattgctgcgcgtgtttaagctggcgcagtcgtggcagactatgaac
atgttgctaagaactatcgccagcagcataggacagcttggtaacctcaccttggtcctg
ggcatcattgtctacatgctggcagttgtaggaatgcaaatctttggaagttcttacact
caagaaaaatttggtgaggacattcctcgctggaatttcaacgactttggtcaggcatgt
atgatgatatttcgaatactttgtggcgaatggattgaaccgctgtacgacagcatgcgg
gcgacgagtccagcatctttcctgtttttcctcacagctttagttattggaaactttttg
gttttaaatctgtttcttgctctgctattgaacgcttttgcacgtgagtcgctacaaggg
gaagcagagaaaagaaaagaagcccgcccgagcaaattttataagggagttcagcgactc
agcaaggtcctccgaattggtagaatatttcctcgtcgcgggacacaagtgaaaccgcag
gccaccgagacacactcatcgacgcacgatgaatcagtcaaagatggaaaagatgttctt
catggatctacggcactgttgaatgcagtgactgctttccagaagaaaggaacgttaaac
agagatacaatgaaaagactttccattgtcatcgaagctgcaaataaggattctaatgca
tccagcactgtgcttaacttggctcgaacatcggcaccgataaccagccctcgtagtagc
gtacaggccgaccaaccagcaaaacaaaccgatgcagaactggcaatgactgaggttcag
gagtgttgtccttgttggatgaaattctgtacatgtaactgcattgctaagtggaaggaa
tccagcagatatcgtgcatggaggaacatgcgtcataacatcaagaaatttgttgagcat
cgatattttgattgggtgatcctgctgattattatctcaagcagtgtcacgttggttttt
gaagatgttcacctcgacagccgtcctacgctgaaggaagtgttgaattacttgaacatt
gtatttgctgtggtctttactctcgagtttctgcttaaaactcttggtttagggctgtta
gaatatttcaagaacctgtggaattgcttagacgtcattatcgttgctatatctttactt
accgctgtcgagtctatggaagagctcacttctactacatcagcttctctcaccaatcag
accattgaagaaagcgacagcagtctatcatcctttcgctcactccgtaccttgagagct
ctcaggccactcagagcgatttcacgctgggagggtatgaaggttgttgtaaactcattg
ctatttgcgatacctggtattggcaatgttctgttggtttgcatggtgttttggctcata
ttcagcattgttggagtgcagttttttggcgggaaattctttagatgcgtcaacagtcga
ggggaacgactttcggtcgactcagtaaccaacaaaacagaatgcatcaggcttagctac
cgttgggttaacgccaatatcaactttgacaatgtgctcaatggtttaatcgctcttttt
caagtggccacttttgagggatggatggaggtcatgagagatgctgttgatgcccgacag
atcgacgagcaaccagaaagcaaccacagttttactccttatttgtattttgttatcttt
attatcgttggttctttcttcacgttgaacctcttcatcggagtcatcattgacaacttt
aaccggctgaaaaaacaggtaaaacaactgagctttcgacggaatgtgttggtgaagtgg
caggctggtttgtttgacataattcacagttcaaaatttgaaacattcattatgatcctg
atctgtctgaatatgcttgtgatgatgatacaacaccacgaacaaaggccagaagtagac
ttaattatgaatgttatcaatctagtatttacagccatatttaccttggaagcaattgtc
aggattgtagctcaacgtctgcattattttaccaaaccgtggaatatcttcgacttcacc
atcgttatcctcagtattgtaggaatagttttggaatacctacactataatttgtttgtc
acaccaagtctgttccgcgtcgctcgtgtgtttagaattggtagattgcttcgtttttac
aaaggtgctcgaggaatccgccgccttctcttcgctctggtaatttctttgcctgcactg
ttcaacattggagcattgttgtttcttgtcatgttcatttatgccatcattggaatgtcg
tcatttggatatgttaaaaagacaggagcattgaacgatgtggtgaactttgagacgttt
ggtaacagcatgttgctgttgttccggctctccacctcagctgggtggaacgatgttctt
gagccgctcttgattcaaccacccgactgtgacgaacatcaccgaagacaaccaaatggt
gattgcgggacaccatggcttgcaattgtgtacttcatttcttttattcttttaacattc
ttgatcatcattaatatgtatatagccattattttagaaaacctaagccaagcacacgag
caggatgaagttggaattacggaagacgatttggaaatgttttattccctttgggagcag
tatgaccctcaagcaactcaatacatttttcattctcagctgtctgacttcgttgataat
ctcgaacctccgctgagaatccctcagcctaataagtttgcgtgtattcatttgaatatc
cctatcaaaaagggagaaagaattcattgcttcgatgtcatgcaagctttggtgagaaga
gttattgggaccattgaggaggacggctctgtggcctttgcccttatgaagtctagaatg
gaacatcattttgtccgtgcgttcccaaaacgtgcgaaaaccaaaaccgaaagcacgact
ttgaaaaggactcaagaaattcgcgcagctacaataatccagcgatcatacagacaatat
cgctttcagttagaactcagaaagttcaggctacaaaaaagtctgaaaccggtagaaaac
gacgcacactccacaattggcgatgaattccacaggagtggtccaatgcaaggaaaccac
agagcctag
DBGET
integrated database retrieval system
