Acropora digitifera (stony coral): 107333636
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Entry
107333636 CDS
T04352
Name
(RefSeq) protein SMG5-like
KO
K11125
protein SMG5
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107333636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107333636
03032 DNA replication proteins [BR:
adf03032
]
107333636
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107333636
mRNA cycle factors
Common to processing body (P body) and stress granule
107333636
DNA replication proteins [BR:
adf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
107333636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
107333636
NCBI-ProteinID:
XP_015753952
LinkDB
All DBs
Position
Un
AA seq
965 aa
AA seq
DB search
MEIRIMSSMQLANRIDIQLRSVVEFQELFHPDAIALRQKLRVQCESLILKHPKEYGRRAE
ERLWRKAFYDVIQKLRNHRKLLEDGCDALDGVLRMHLSSAAGYYYHLLTHLQRCYHLGLE
NLLSWGISPHHAVDGDPETISWAVKACQRCLIYLGDIGKYIQGQPSDEEAGIYLGFCFCY
FILCLMWLWCFSLFSKEVFEGAEGNLLRIFEKNRSLVHRIKELPLDEPRPNERIKRFLVY
FLYLQDVLFKHENSPDISTEDTGHLCQSVLQDFNSALSVDVSPSDTQSQVLQNGFTSQEN
GHQHPDTINGSDGVISGSLMVKLVVMTIATVTRLQSKGAQEYSMAIAFTLSFLSFLIQKC
ISSFENFSANEHLHPEKPITNGMQNDSQVLNGSSAAMPKNENSFPLFNANSDSSEARKLK
RTLQHRRRRRRRKNVDYSFDSYSGSGSDSEESGEEGSDDSDLSEGGGEGEISDRMSDESD
DVYIESESDDENGNTGSFVNTVSSAKQPEKNVMPKPVDNSVSPHTVGGKPGLKSGIFKQN
GISVGKILRADLISDVSDTETESSVASRTELLRDCAESNILKAVTGQKLLPAIKVMTDWL
RLNGELLLTCVESLGTLLSRLAVLLNMFPTAEQMISAVPVPRRPTWQSVLDETLDKNWVQ
SRGLPEDMSLLGFTPLNTIHSRLDKKWSRLTRDCHYLEAAVRVQCLRSFGMKLASVEELN
SFNWDRKALRFIGPQQMTEPGKQQATEKHHRTTPVHGNHDRRSRVMKAMAQQLLQSEVAA
LESNLKTAPSSSSTVYVVPDATALCTQLHLLRRLVTTERMVIIIPIQVISALDELKKYDS
GAREATKYLEQEFKRGNRWIRAQKEDETLNSGKRRGRYEDVAVWRFGQIVNCCQYFVKET
GRGLVTLLTGETSYELPKKGKKKGVTSNGTQATPETVELARSCGVGVESLRAFCSRFFQQ
SKSVT
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggagataagaataatgtcttctatgcagcttgctaacaggattgatattcagctgagg
tctgttgttgagttccaagaactttttcacccagatgctattgcgctccgacagaagttg
agagttcagtgtgagagcctgattctgaaacacccaaaggaatatggtagaagagctgag
gagcgtctgtggagaaaagccttttatgatgtcatccagaagttaagaaatcacagaaag
ctcctggaggatggctgtgatgcccttgatggtgttcttcgaatgcatttgtcctctgca
gctggatattattatcatctattaacacacctgcaacgctgttaccaccttggattagaa
aatctgctgtcttggggaatttctccccatcacgctgttgatggtgaccctgagacaatc
tcttgggcagtaaaagcatgtcagcgttgtcttatttacctaggagacattggtaagtat
attcaaggacagccttcagatgaggaagcaggaatctatcttggcttttgtttttgttac
ttcatcttgtgtctaatgtggctgtggtgttttagtcttttctcaaaggaggtatttgaa
ggtgctgaaggaaacttgctcagaatctttgaaaagaacagatctcttgtgcacaggata
aaggagctgccactggatgaaccaaggcccaatgaaagaattaagcgatttcttgtgtat
ttcttgtacctccaagatgtcctattcaaacatgaaaactcacctgatatcagtactgag
gatactggccatttgtgtcaatctgtgttgcaagacttcaacagtgcactatcagtagac
gtatctccgtcagatacgcaatcacaagttctgcagaatggcttcacatctcaggagaac
ggacaccaacaccctgacaccataaatggaagtgatggtgtcattagtggctcacttatg
gtgaagctcgttgtcatgacaattgcaactgtgacaaggttgcagtccaaaggtgcccaa
gaatactctatggcgattgcctttaccttatcgtttctatcttttcttattcaaaagtgc
atttcttcttttgagaacttttctgcaaatgaacatttgcaccccgagaagccaattacc
aatggaatgcaaaatgattcccaagttctgaacggttccagcgcagcaatgccgaaaaac
gagaattccttccctttattcaatgcaaatagcgattccagcgaagcgaggaaactaaaa
cgaaccctgcagcatcggagacgaaggcgccgacgaaagaatgtagattacagcttcgac
agctacagtggaagtggcagcgactccgaggagtctggggaagagggctcggatgacagt
gatttaagtgaagggggaggggagggtgaaatatctgatagaatgagtgacgaaagcgat
gacgtttacattgaaagcgaatcagatgacgagaatggcaacactggctcctttgttaac
accgtgtcttctgcaaagcaacctgaaaagaatgtcatgccgaaaccagtcgataactca
gtcagtccacatacagtaggtggcaagccaggattaaaatctggtattttcaaacagaat
gggatttcagttggaaagatcctgagagccgatctgattagtgatgtcagcgacacagaa
actgagtcgtccgtggcgtcaagaactgagctgttgcgtgactgtgcggagtccaacata
ttgaaggctgtcacgggtcagaagttattacctgccattaaagtcatgactgactggctc
cgtttgaatggtgaacttctcttgacttgcgtcgagagcttgggtaccctgttgtccaga
ttggccgtgcttctaaacatgtttcccacagcagagcagatgatatcagcagttcccgtg
cctagacgtccaacatggcaaagcgtgcttgacgagacactggacaagaattgggttcag
tctcgtggccttccagaggacatgtcattgttgggatttacaccactgaacacaatacac
agcaggctcgacaaaaagtggagtaggcttacgcgagattgtcattaccttgaggctgcc
gttcgagttcagtgcttaagaagttttggtatgaagcttgcgtcagtcgaggaattgaat
tcattcaattgggaccgaaaagcactgcggtttatcgggcctcaacaaatgacagaacca
ggaaaacaacaagcaacagaaaaacaccatagaacaacaccagtgcatggaaatcacgac
cgtcgctcacgagtaatgaaagctatggctcagcagttgttgcagagtgaagtggcagca
cttgaaagcaatcttaaaacagcgccatcaagctcgagcacagtatacgttgtaccagat
gccactgcactgtgcactcagctccatcttctgaggagactggtaactacagagaggatg
gttatcatcattccaattcaagtgatatcggcgcttgatgagctgaagaaatacgacagt
ggggcaagagaagctaccaagtatttagagcaagaattcaagagaggaaatagatggatc
agagctcagaaagaagacgagacgcttaattcaggcaaaagacgaggtcggtacgaggac
gtagctgtgtggcgttttggtcagatcgtgaactgttgccaatacttcgtgaaggagact
gggagaggtctcgtcaccttactgacgggagagacttcgtacgagctccccaaaaagggc
aagaaaaagggcgtgacctccaatggaacacaggccaccccagaaacggtagaactcgct
cgaagctgcggcgtcggtgtggagtcgcttcgtgcgttctgctcgcgtttttttcaacag
tcaaagtcggttacttga
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