Acropora digitifera (stony coral): 107334406
Help
Entry
107334406 CDS
T04352
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107334406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107334406
03036 Chromosome and associated proteins [BR:
adf03036
]
107334406
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107334406
Coactivators
SAGA/TFTC/STAGA complex
107334406
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107334406
STAGA complex
107334406
TFTC complex
107334406
SAGA complex
107334406
SLIK complex
107334406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
TFIID_NTD2
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_like
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
DUF7165
Beta-prop_DCAF12
WDR54
Cytochrom_D1
YkuI_C
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
107334406
NCBI-ProteinID:
XP_015754823
LinkDB
All DBs
Position
Un
AA seq
595 aa
AA seq
DB search
MSAHEKNQMNEQLSSVITSFLKKRKYAESTISVKDFATEQKMEEMAFKTTVCNESGIPNV
FSFAINTSDLVTVDEDYTAFKSFITGTNQAYRQELSKFLFPMFANIYLDLVAKGQTLPAQ
NFFVKHSGEFSAEHKEEIQHLQVITDMECLKSSDIASNFRRSKFVIKLSSKVFTYFLQYL
RSGDHVLLLHLLNKHFSIEISHSKPGQRQYGDEINTDEAEPSASGHRATKGAKQAKSTVE
KTNDNLVALRESIGQVRSGPASLPSVCFYSFLNAHQGLSSAAISKDASLVCGGFEDSSIL
LWSLTPKKLVHPRSKPEISKIQLSPDLVAPSSKLETLSSERVTLQGHCGAVYHTCFSPDN
TILLSSSEDASVRLWSLHSYTNVVAYKGHNFPVWGLDISPQCHYFATGSHDRTARLWNFE
YTFPLRIFAGHLQDVDCVKFHHNCTYLASASADKTCRLWDLQSGNCVRLFTGHKGSVYDL
AISSDGQYLVSAGEDRRILIWDLSAGSMIKELRGHTDTVYSLAFSADGTLLVSGGLDSSV
RIWDFGQAVKSSNSSTTNTNTSPEQMASLSTKNCTVHCVQFSSCNLVLSAGAQTT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacatgaaaagaatcagatgaatgaacagttatccagcgtaatcactagcttt
ttgaaaaagagaaagtacgcagaaagtacaatttcagtgaaagattttgccacagaacaa
aaaatggaggaaatggctttcaagacaacggtttgcaacgaaagcgggattcccaatgta
ttttcgtttgcgatcaacacctctgaccttgttacggtagacgaggattacactgctttt
aagtcattcataacaggaacaaaccaagcttacaggcaagagctatccaaatttcttttc
ccaatgtttgcaaacatttacctggatttggttgccaaaggtcaaactctacctgcgcag
aacttttttgtaaagcacagtggtgagttttcggccgaacataaagaggaaatccaacat
ttacaagtcatcactgatatggagtgtttgaaatccagcgacattgcttcgaattttcga
cgcagtaaatttgttatcaaattgagcagtaaggtgttcacgtattttttgcaatatctg
aggagcggtgatcatgtattgcttctccatctgctaaacaaacacttcagcattgaaatt
tcccacagtaaaccaggacaaagacagtatggggacgaaataaatacagatgaggctgaa
ccttctgcatcaggtcacagagcgacaaaaggagcaaagcaagccaaatccacagtggaa
aagacaaatgacaacttagttgcgttgcgagaaagcattggacaggtcagaagtggacct
gcgagcctgccttccgtttgtttttattcattcttgaatgcacatcaaggcttaagctct
gcagccatttcaaaggatgcaagccttgtctgtggtggatttgaagattcatctattctg
ctgtggagccttacccccaaaaagctggtacatccaaggagtaaacctgagatctctaaa
atccaattatccccagatctagtggcaccctcctccaaactggagacactctccagcgag
cgtgttacactgcagggtcattgtggtgcagtctaccatacatgcttctcaccggacaac
accatcctactgtcatcttcggaagatgcttcagttcgcctgtggagtcttcattcgtac
accaacgtagtcgcatacaaaggtcataactttcccgtgtggggcctggacatcagtccg
caatgccactactttgcgacgggctcccatgaccgcacggcccgactctggaactttgag
tatacttttcccttgaggatatttgcagggcacctccaagatgtggactgtgtgaaattt
catcacaattgtacttacctggccagcgcttctgcggacaaaacatgtcgtctgtgggac
ctgcaatcgggtaactgcgtcaggctcttcaccggacacaagggctctgtatacgattta
gcgatatcctcagacggccagtacttggtgtcagccggggaggacaggcgcattctcatc
tgggatttgtccgctggcagtatgatcaaagaattacgcgggcacacggacacagtgtac
agccttgctttcagcgcggacgggacgcttcttgtctctggaggactggatagcagcgta
aggatctgggactttggacaggcagtgaaatcgtccaacagtagcaccacaaatacgaac
acttccccagaacaaatggcttcgttgtccaccaaaaactgcacggttcattgcgtacaa
ttcagtagctgtaacttagtcctctcagctggcgcgcaaacaacttaa
DBGET
integrated database retrieval system
