Acropora digitifera (stony coral): 107334494
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Entry
107334494 CDS
T04352
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03030
DNA replication
adf03420
Nucleotide excision repair
adf03430
Mismatch repair
adf03440
Homologous recombination
adf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107334494
03420 Nucleotide excision repair
107334494
03430 Mismatch repair
107334494
03440 Homologous recombination
107334494
03460 Fanconi anemia pathway
107334494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adf03000
]
107334494
03032 DNA replication proteins [BR:
adf03032
]
107334494
03400 DNA repair and recombination proteins [BR:
adf03400
]
107334494
Transcription factors [BR:
adf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107334494
DNA replication proteins [BR:
adf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107334494
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107334494
MMR (mismatch excision repair)
107334494
DSBR (double strand breaks repair)
HR (homologous recombination)
107334494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
107334494
NCBI-ProteinID:
XP_015754913
LinkDB
All DBs
Position
Un
AA seq
646 aa
AA seq
DB search
MLTEGAIQDILFKPAEQHPQKPIFQILGIKKIQTKSSDGAGNDRYRLVVSDGINLYTSAM
LATQLNDLVISKHIEAKAVVQLDKYICNIIQETRKVLIVLEVSVLKTANEVVGKIGDPKP
INVESKPEQQQQHQNLQQNVSGPVQRNMSDDFHQNQPQRGSAGQVPAQQQSRAGVMGGNK
LGAPVRTGGLASATYGSNQQVSRGGNNPKPVYPISSLTPYQNRWTIRVRVTSKSNIRTWS
NSKGEGRLFNVDFVDESGEIRATGFNDVVDKFYELLEVNKVYYISKCSLKTANKQYSSIK
NDYEMYINNDTIIELCHDPCDLPTIQYNFVSIGDLSNCNGNDIVDILGVVINIDEVSQIT
TRASNRQISKRDIMLLDRSEKSVRATLWGDYAEKFEDHNGKNPVLALKGVKVSEYGGRSL
SVLNSTNIMVNPLDLKEAHSLRGWYMNVGKDTAIESMSGQRSDGSLGAGSYKTLLQVKSE
QLGMGDKPDYFTAKATAVFFKKDNCLYKACPSPECNKKVIEEGDGTYRCEKCNKTHPDFK
YRLILSANLADFSGNQWVTCFQDSAEAILNTSASHIGQMKDSNDEQAYDQIFSEANFKTY
NFRIRAKMETYNDETRLKCSCMGATPLDFQKECRRLIEEIKKLQAL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttaactgaaggggcaattcaggacattttgtttaagccagcggaacagcatcctcag
aagcctatatttcagatattaggaattaaaaagatccaaaccaagagtagtgatggagct
ggcaatgaccgttataggctcgtggtttcagatggtataaatctctatacttccgccatg
ttagccacccagctcaacgacttagtgatctccaaacacattgaagctaaagctgttgtg
caactggataaatacatatgtaacatcattcaagagacaaggaaagttttgattgttttg
gaagtatctgtgttgaaaactgctaatgaagtggtgggaaagattggagaccccaaacct
ataaatgtggaatccaaacctgagcagcaacaacaacaccagaatcttcagcaaaatgtc
agtggaccagttcagcgtaacatgtcagatgacttccatcagaatcaaccacagagggga
tcagcaggccaggtacctgcacagcagcaatccagagctggtgtcatgggaggtaacaaa
ctaggagctcctgtcagaacaggggggcttgcctctgcaacttacgggagcaatcagcaa
gtttcgcgaggaggaaataatcccaaaccagtttacccaataagttcattgacaccatat
caaaacaggtggaccatacgtgtgcgggtaacaagcaaatcaaatattcgtacttggagt
aactccaaaggcgaggggcgtctctttaatgttgattttgttgatgaatcgggtgaaatc
agagccacaggatttaatgatgttgttgacaagttttatgaactcctggaggtcaacaag
gtgtactacatttccaaatgttccttaaaaactgcaaacaagcagtattcctccatcaag
aatgattatgagatgtatataaacaatgatactatcattgagttgtgtcatgatccttgt
gacttgccaactatccagtacaactttgtcagcattggtgacctgagcaactgcaatgga
aatgatattgttgacattcttggagttgtgatcaacattgatgaagtttcacagatcacg
acaagagcatctaaccgacaaatatctaagagggatattatgttgttggacagatcagag
aaaagtgtgcgagcaactctctggggcgattatgctgagaaatttgaagatcataatgga
aagaatccagttcttgccttgaagggagtcaaggtgtcagagtatggaggtcgttctcta
tcagtactgaactccacaaatataatggttaatccattggatctcaaagaagctcacagc
ctgcgtggatggtacatgaatgttggtaaagatactgctattgagtcaatgtctgggcag
agatcagatggatctctcggtgctgggagttacaagactttattgcaagtcaagtcagag
caacttggaatgggtgataaacccgactatttcacagcaaaagccacggcagttttcttc
aagaaagacaactgtttgtacaaggcttgcccttccccagaatgcaataagaaagttatt
gaagaaggagatggaacttatcgttgtgaaaagtgcaataaaacccatcctgatttcaaa
tatcgcctgattttgtcggcaaatttagcggatttttcaggtaatcagtgggtcacatgt
ttccaggattcagcggaggcaatattaaacacaagcgcaagccatatcggtcagatgaag
gactcgaatgacgagcaggcctatgatcaaatcttttccgaagccaacttcaagacttac
aacttcagaatccgggctaaaatggagacctacaatgatgaaactcgcctgaagtgttca
tgtatgggtgcaactccattggatttccaaaaggagtgcaggcgacttatagaagagatt
aaaaagcttcaggctctttag
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