KEGG   Acropora digitifera (stony coral): 107334525
Entry
107334525         CDS       T04352                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03013  Nucleocytoplasmic transport
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107334525
  09122 Translation
   03013 Nucleocytoplasmic transport
    107334525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107334525
   03041 Spliceosome [BR:adf03041]
    107334525
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107334525
Spliceosome [BR:adf03041]
 Complex C
  Other components
   EJC/TREX
    107334525
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107334525
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd eIF2A Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st PD40 TRM82_WD RMC1_N Beta-prop_NOL10_N DSE1_N WD40_MABP1-WDR62_2nd Tricorn_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR35_TULP_N PAC11 Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Beta-prop_Vps41 NBCH_WD40 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_ELP1_1st DPPIV_N WD_LRWD1 HSF_DNA-bind Beta-prop_WDR41 CDGP
Other DBs
NCBI-GeneID: 107334525
NCBI-ProteinID: XP_015754952
LinkDB
Position
Un
AA seq 166 aa
MAPGDYLNEMKRYFENNSRTKDFIAHTAKVHSVAWSCDGRRLASGSFDRTVSIFVLEKDR
LTKETNHKGHGESVDQLCWHPSSSNFLVTASGDKTIRIWDARASKCVSVVNTKGENINIC
WSPDGNTIAVGNKEDLITFIDARTYKARCDEQFKYEVSECTHLCSR
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcgccgggagactatctgaacgagatgaaacggtattttgaaaacaactcaagaacg
aaagactttatcgcccacacagccaaggttcattctgtagcttggagttgtgacggcaga
agactcgcttcaggctcatttgacagaactgttagcatttttgtgttggagaaggaccgt
ttaactaaagaaacaaatcacaaaggccatggagagagtgttgatcaactttgctggcat
ccaagtagctctaattttctagtgacagcatctggtgataaaacaatcagaatatgggat
gccagagcgagcaagtgtgtatctgttgtaaatactaaaggagaaaacataaatatttgt
tggagccctgatggtaatacaatagcagttgggaacaaggaagatctaataacatttata
gatgcaagaacttataaagcaagatgtgatgaacaattcaaatacgaagtgagtgaatgc
acacatttatgcagcaggtaa

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