Acropora digitifera (stony coral): 107336223
Help
Entry
107336223 CDS
T04352
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107336223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adf03400
]
107336223
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107336223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_II
PWWP
Motif
Other DBs
NCBI-GeneID:
107336223
NCBI-ProteinID:
XP_015756770
LinkDB
All DBs
Position
Un
AA seq
1077 aa
AA seq
DB search
MATLFSYFNKTPKGKKPPSPVCSEIADKKKSNSPKEGAKGFSPINEDKARVNGKAKRKNE
ESCSGEIQLYDVVWAKLEGHPWWPSLVCKHPTQDAFQQKGKYHVQFFGEPPSRAWVKMKF
FRGTIVQRRIVRLLHSNLVENWTLIERSLFIAGSIRAAQQAEDTLSLAREQRNKLVKCLP
SDEEESSEEEGQSMQLDGENLDKALNSQKRKNAGHDDDDDSDEEVIGRKQNGKRPRRKAT
LRNSKTKKRRVIQSGSEGDSEDDYKPDDDNDDDDESCSSGVDEKELEDEVLHSEDEIDDN
TEKQSRKRKRGKVFTPHQQKTKSRKPSTPCTPVTSGASSVNTPSPSGVLPGTLAKKVSSS
ASKAAESLARFQMTASPTPSSNVDKEGGEGSYTHEKLDWLKEDKRRDKHGRPMSHPEYDP
RTLLVPSSFLSSKEVTPFVQGNFAHAGFPEIAFGRYSDTLIQKGYKVARVEQTETPEMMK
ERCRKTLSVSRSDQVVKREICAVITKGTKTYSFLDGDCTDSEAAYLLAISEKGSDDSSGG
ESVYGVCFVDTSIGRFHIGQFQDDRQASRLRTLVAHYTPVQVLCCRGGVTLKTQHVLSHE
LMSSMKEYLIPGSQFWEASKTLKVLAEEEYFKEDKTSTENSVKSWPEILRKLTDGGSQFW
EASKTLKVLAEEEYFKEDKTSTENSIKLIIILIDPGSLPSSDPTTFLQKAFIITVCQICC
FALFQTWPEILRKLTDGDSLGLIPADGTELALSALGAVVWYLKKSLIDHEVLSMGNFEVS
EQYKTWDKAVQCLAVLDSLISLASYRLCVTLKGPHTVLKQQNMPFFEIRDGRHPCISRTF
SGGDFIPNDTVVGIKNDEDCEETAVNSHSTCVLVTGPNMGGKSTLMRQAGLILIMAQMGC
FVPAEKCRLTPVDRVFTRLGAQDRILSGESTFFVELNETSTILKHATQHSLVIVDELGRG
TATYDGTAIACAVVRALSSQIRCRTLFSTHYHSLVEEFSADENVRLGHMACMVENEDDTD
PIKETITFLYKFVKGACPKSYGFNAARLAGIPDEVIALAVKKARQFEESTERIKVFR
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttttctcttacttcaacaaaacaccaaaaggcaagaaaccaccgtctcca
gtctgcagtgaaattgcagacaaaaagaaaagcaattccccgaaagaaggagcaaaaggc
ttttcgcccataaacgaggacaaagcaagagttaacgggaaggcaaagagaaagaacgaa
gaatcatgttctggagaaattcaactttatgacgttgtgtgggctaaactcgagggtcat
ccatggtggccaagtttggtttgcaagcatcctacgcaagatgcatttcagcaaaagggg
aagtatcatgtacagtttttcggcgaaccgccaagtagagcttgggtgaagatgaaattt
tttaggggaaccattgtacaacgcagaattgtgcgattgcttcactcaaatttggtggag
aattggaccctaattgaaaggtctctcttcatagcaggatcaatcagggcagctcaacaa
gcggaggataccctgtctcttgcaagagaacaaagaaacaaacttgtgaagtgcttaccc
tcggacgaggaagaatcttcagaagaagagggacagtcaatgcagttggacggagagaat
ttggacaaagccctgaatagtcagaaaagaaagaatgcaggtcatgatgatgatgatgat
agcgatgaggaggtcattggaaggaagcagaacggcaaacgtcccaggaggaaagctact
ctaagaaattctaaaacaaagaaaagacgagtaattcaatctgggtctgaaggagattct
gaagatgattataaacctgacgacgataatgatgacgatgatgagagctgtagcagcggc
gtagatgaaaaggagttagaagatgaggtgcttcattctgaagatgagattgacgataac
actgaaaagcaatcacgtaagcgcaaaagaggaaaagtgttcaccccacatcagcagaaa
acaaagtctcgtaaaccttccacaccttgcacacctgtcactagtggtgcatcctcagta
aacacaccttcaccctcaggagtactgccagggacattagcaaagaaggtatcaagctcg
gccagtaaggctgcggaatctttggccagattccaaatgactgcatcgccaacccctagc
tcaaatgtagacaaggaaggtggtgaaggaagctatactcatgaaaagttggactggtta
aaagaagataagagaagagacaaacatggcagaccaatgtctcaccctgaatatgatcca
agaacactactggttccctcgtctttcttaagctccaaagaagtaacaccttttgttcag
ggtaattttgctcatgctgggtttccagaaattgcatttggtcgttactctgatactcta
attcagaagggttacaaggttgcaagagtggaacaaacggaaaccccagagatgatgaaa
gagagatgcaggaaaactctctctgtgtcaaggtctgaccaggtggtcaagagggaaata
tgcgcagttatcaccaaaggaacaaagacatacagttttcttgatggtgactgcacggac
agcgaggcagcttaccttctagctatttctgagaagggatctgatgattcttcaggaggt
gaaagtgtttatggagtttgttttgtcgatacatctattggaagatttcatattggacaa
tttcaagatgatcgccaagcttctcgcctcaggacactagttgcccattatactccagtg
caggtgttatgttgccgaggaggtgtaaccttgaagacccaacatgtgcttagtcacgaa
ttaatgtcatctatgaaagagtatcttattccagggtcacagttctgggaagcaagcaag
acattgaaagtcttagcagaggaagaatatttcaaagaagacaagacaagcacagagaat
tctgttaagagctggcctgagatattgagaaaattaactgatggagggtcacagttctgg
gaagcgagcaagacattaaaagtcttagcagaggaagaatatttcaaagaagacaagaca
agcacagagaattctattaagttgatcattatcctcattgatccaggctctttgccaagc
tcagatcctactactttcttgcaaaaagcctttattataacagtgtgccaaatttgttgt
tttgccttgttccagacctggcccgagatattgagaaaattaactgatggagattcctta
ggattgataccggctgatggcactgaattagcgttgagtgctcttggtgcagttgtgtgg
tatctgaaaaagtccctcatcgatcatgaagtgttgtcaatggggaattttgaggtaagt
gaacagtacaagacttgggacaaagctgtccagtgtcttgctgtgttggactcgcttata
agccttgcttcttacagactctgtgtgactttgaagggcccacacacggttctcaaacag
cagaatatgccattctttgaaatccgcgatggccgccacccttgcatttctcggaccttt
agtggcggtgatttcattcctaatgacactgttgttgggataaaaaatgacgaggactgc
gaggagacagcggttaacagtcacagcacatgcgtgttagtcaccggtcctaacatgggt
ggcaaatcaactctgatgagacaagcaggacttattttgatcatggcgcaaatggggtgt
ttcgtgccagctgagaagtgccgtctaacccctgtggatcgtgtttttaccagacttggt
gctcaagacaggattttatcaggtgaaagtacgttctttgtggagctcaatgaaacatct
accattctcaaacacgctacccagcattcactggtcatcgtggacgagcttggacgaggg
accgccacctatgatgggacagctatcgcttgcgctgtagttcgagcgctgtcgagtcag
ataagatgcagaactctcttctctacacattaccattcacttgtggaagagttctccgcc
gatgagaatgttcgtcttggtcatatggcctgcatggttgaaaacgaggatgacacagac
cccatcaaggaaaccataacgttcttatacaaatttgtcaaaggcgcatgtccgaagagt
tatgggttcaatgcagctagattggctggcattccagatgaggtgatagcacttgctgtg
aaaaaagccagacaattcgaagaatcaacggaaagaataaaagtcttccggtaa
DBGET
integrated database retrieval system
