Acropora digitifera (stony coral): 107336460
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Entry
107336460 CDS
T04352
Name
(RefSeq) uncharacterized LOC107336460
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107336460
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107336460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107336460
NCBI-ProteinID:
XP_015757027
LinkDB
All DBs
Position
Un
AA seq
1419 aa
AA seq
DB search
MAADEEIKKMNEKLNFLSSKFDPLTALCNSKLQPPVPNIYVFNNLSEYTNAIREGKIKPS
EYKPSESHSSSTEAASRTRNLKPEYKQDNKKRLKERLKAMSESEGNGVGGTKLEKKRGGR
IDDTKLKELLLVEETFKRKQTAKKRMNVMQKMEAYTEGPYSLLLKCVTERRRVRVWTRRY
KGLRSVLAGYLVAFDKHMNMALLDVDEVYTIEQRINQDAGGVSPSSKSTAKRKKKKKSVL
ENELPCELAGTVEISLPTSASDTGELDLFTKEGNRERSSERNSPKEFLPLQPITSNQSSK
ESVSTCKEEHCQISASDNEVAATSDCASIIDLPLSGNESVLPSAQSLSIALRASVSGLDD
DFLKLTEVTLTEAVLDNAAELETVMGQNDSSLATREENCALNISWNDKLIEKMKKDKEES
NKLANTETFDNKESGETGDVRDLSSCSFSNNDSGVVSNSILNNNTKQGQGLRLRTKGSCL
PPNGMELLRDNGIADYHTTMPIENSQQLTAMGKEDKLIKIPDTGRLRNSEHDVHEKNLLQ
MEAETHKIDIKDLCDLRENCLNKKALVVCCSEKDDSSNSDIVTFLRSSSIVSTEAVASFS
TKGETVMQRAEAQLNERAANESCKDANLAHCLVDYDLIRSETPLCKDPVSSESRFTLCSE
TANAIPNEVRQEPGSPSRPRSDTPSINAPFSEVVSNTEEESTSRYHEGKGDKCFFHKKDQ
HDLALKSSATVLQEGELQEDYHSITQVTQMFSEPKEDGASAKLEDLEKVPHDALKHENSG
QDILENSKTAASFSSETNSPFRNLLSMTGKIADAQASSHSFREGVNVNPGQKEAHNETSS
MKGDEKNCQSLKTEVGIGEKRTYKKTHKNDDNSDKATEYNPHKEEGEISSVKDDGLPPNE
KSKNEEKEEGELSSSDSDDDSSLVKHCDTNDGKGVQSDNRLKNEKKQARPRARTDSSRDF
PDKFLDDRSNSRREYSSHSVQNAGLRRKLRGSRKKVLPSTKVNSSKETSNRVRNRSRSDM
AAKKNNCVEKHNRDELLTEEQKHGKAQSTGTKDERRSFIHSAQGKECKTKEKGKFLDKQN
EKPSNSSQDAETIKKRSESKSEIKNRSNIQYPPETDKIVPNKFELHQLSTKDKETKKLRT
PENATVDKDFKEETQLSKTVTRTRAKTTLHPQIVKTGTKSVRPLSRQSEETLMRRPLSVD
NFGSRKHVSENSKGSTISHRTHCLEQSKTKRKDEAKTTTTDIGKWDISGKRKTTPSKTAP
RVTTRNTPKKSPIANKRRTKPQNSDNPLENPRKRIRPTESTEKRKSKKARGDEQRNSSTA
DTIEPNMSTAIAQCNDVKNSESFCIKVKDSANQMNPDKLEYFQLNKTEHKCQNSPAIKSV
ASRAKPILFGRNKFLVFKRRHVNQLFIRGDNVAMIAYAE
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacgaagagatcaagaaaatgaatgaaaagttaaattttttgtcgtcaaag
ttcgacccgttaactgctctttgtaacagcaaattacaaccaccagtgccaaacatatac
gtattcaacaacctttcagaatatactaacgcaatcagagaaggcaagataaaacccagc
gaatataagccttcggaaagtcactcttcttcaacagaagctgcaagtcgaacaagaaac
ttgaaaccagagtacaagcaagacaataaaaaaagactaaaggagaggcttaaggccatg
tctgaatcggaagggaatggagttggtggtacaaagttggagaaaaagagaggaggtaga
atcgatgatacaaaactgaaggagttacttttggtagaggagacctttaaaaggaaacaa
acggccaaaaagcgtatgaacgtaatgcaaaagatggaagcatatacagaaggaccctat
agtttattgcttaaatgcgtaactgagaggcgaagagtgagggtatggaccagaagatac
aagggtctgcgcagtgttcttgctggataccttgttgcctttgacaagcatatgaacatg
gctcttttggatgtggatgaagtatacaccatagagcagagaattaatcaagatgccggt
ggagtatccccttcctccaaaagtaccgcaaaaaggaaaaagaaaaagaagtcggtacta
gagaatgaactgccttgtgaattagctggcactgttgaaatatcattgcctacatctgca
tcagatactggagagcttgatttgtttactaaggaaggaaatagagaaagaagctcagaa
agaaactctcccaaggaatttcttccactccaaccaatcaccagtaatcagtcgagcaaa
gaaagtgtgagtacatgcaaagaggagcattgtcaaattagcgcttctgacaacgaagtt
gcggcgacttcagactgtgcttcaataattgatctccctttgagtggcaatgaatcagtg
ttaccatctgctcagtctttgagtatcgctttgcgagcttctgtgagtggtttggatgac
gacttcctaaagctaactgaagtaacactcactgaagcagttttagataatgctgcggaa
cttgaaacagtgatgggtcaaaatgatagcagtctggctactagagaggaaaactgtgcc
ttgaacatatcttggaacgacaagttaatcgaaaagatgaagaaagacaaagaagaaagt
aataaattagcgaatacggaaacttttgataacaaggaaagcggagaaactggggatgta
agggacttaagttcatgctcttttagtaataatgatagtggagttgtgtctaattcaata
cttaacaacaacacaaaacaagggcaaggtcttcggttgcgaacaaagggatcgtgttta
cctcctaatggcatggaactgttgagagataacggaatagctgattatcatactaccatg
ccaatcgagaattctcagcagttgacggcgatgggaaaggaagacaaattaatcaaaatt
ccagacacaggacgcttaaggaattcagaacacgacgttcatgaaaaaaacttactccaa
atggaagctgaaacgcataagatcgacatcaaagacctttgcgacctccgtgaaaattgt
ttgaataaaaaagctttagtagtttgctgttccgaaaaggacgattcttcaaacagtgat
atcgttacttttcttcgaagttcctcaattgtttcaactgaagcagttgcttcattttca
acaaaaggagaaacagtaatgcaacgtgcagaagcccaattaaacgaaagagctgctaat
gaatcttgcaaggacgctaatcttgcccattgcttggtggattatgacttaatccgctct
gagacaccgttatgtaaagatccagtgagtagtgaatctcgttttaccttgtgttcggag
actgccaatgccattcctaacgaagtaagacaagaacctggcagcccatcaagaccgaga
agtgatacaccatccatcaatgcacctttctctgaggttgtttccaatacggaagaggaa
tcaacatcaaggtaccacgaagggaaaggagacaaatgtttttttcacaagaaagaccaa
catgatttggcacttaaatcgagtgcgaccgtgctgcaagaaggtgaacttcaagaagat
tatcactcaataactcaagttacacagatgttttcggagccaaaggaagacggagcttct
gccaaactcgaagacctggagaaagtaccccatgatgctttgaaacatgaaaacagtggt
caagacattctggagaattcaaagaccgccgcctcattttcgtccgagacaaattcgcca
ttccgtaacttgctgagcatgacaggaaaaatcgctgatgcacaagcttcctcgcattcg
tttcgcgaaggggtaaacgtcaatccagggcagaaagaagcacacaacgaaacttcttcc
atgaaaggtgacgagaagaattgccaaagcctcaagactgaggtaggaattggagagaaa
aggacctacaaaaaaacacataaaaacgatgacaactccgataaggccacagaatataat
ccgcataaagaagaaggcgagataagttctgtaaaggatgatggtttaccgccgaatgaa
aaatcgaaaaacgaagaaaaagaagaaggagagctatcttcatctgattcagatgatgat
tcatcgcttgtaaaacattgtgatactaacgatggtaaaggtgtacaaagtgacaataga
ttgaagaatgaaaagaagcaggctcgtccacgcgcgcgaactgattcgtcaagggatttt
cccgacaaattcctcgatgacagatcaaattctagaagagaatattcttctcattctgta
caaaatgctggtcttcgaaggaagctgcgtggatcccgaaaaaaggtattaccatcaaca
aaagttaacagttcaaaggagacaagtaaccgtgttcgtaatagatcgagatctgacatg
gctgccaaaaagaacaactgtgtagaaaagcataatcgggatgaactgctaactgaagaa
caaaaacatgggaaagcacaaagcactggaaccaaggatgagcgaaggagtttcattcat
tctgctcaaggaaaagaatgtaaaacgaaagaaaaagggaagtttcttgacaagcaaaat
gaaaagccaagcaattcttcccaggacgcggaaacgataaagaaaagaagcgaatcgaag
agtgagattaaaaatcgcagcaacatacaatacccacctgagaccgacaagatagttcca
aataagtttgaacttcaccaattgagcacgaaggacaaggaaacaaagaaattaagaact
cctgaaaatgcgacggtcgataaagactttaaggaagaaacacaactttcaaaaacagta
acacgcacaagagcaaagacaactttgcatcctcaaattgtaaaaaccggaacgaaatca
gtcagacctttgagcagacagtctgaagagacattaatgaggagacctttgtcagtagac
aattttggcagtagaaaacatgtttcagagaatagtaagggaagcacaatctcacataga
acgcactgtctagagcaaagcaaaactaaaaggaaagatgaggcgaaaactacgacaact
gatattggaaaatgggatatttcaggcaaaaggaaaacgactccgtcaaagactgcaccg
agggttactacaagaaacacaccaaagaaatcccctattgcaaataaaagaaggacaaag
cctcaaaacagtgataatccattggagaatcccaggaaacggataaggcccacagagagc
acagagaaaaggaaaagcaaaaaagcccgaggagacgagcaaagaaattctagcacagct
gacactatagagcccaacatgtcaacggcaattgcccaatgtaacgatgtgaaaaacagt
gaatcgttttgcatcaaagtgaaagactcagcaaatcaaatgaacccggacaaactcgag
tattttcaactcaataaaactgaacataaatgccagaatagtcccgccataaaatcagtt
gcatcacgggcaaaaccaattttgtttggtcgaaataagtttttggtgtttaagcgacgt
catgtcaatcagttgtttataagaggagacaatgttgccatgatagcttatgctgaatga
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