Acropora digitifera (stony coral): 107336683
Help
Entry
107336683 CDS
T04352
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107336683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107336683
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107336683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
107336683
NCBI-ProteinID:
XP_015757236
LinkDB
All DBs
Position
Un
AA seq
724 aa
AA seq
DB search
MDTNGEAFGNGADERLVNSDPKDGTVTFWSKTERGIKAETRLQNHPYDTESWGVLIREAQ
STPLETSRVLCEKLVRRFPNAGRYWRLYIEQEIKNNNYEQVEKLFQKCLIKVLNIDLWKC
YLSYVRDTKCSLPNFRDKMLQAYEFALEKVGVDFNSYQIWIDFVNFLKTGEAVGSYAENR
KIITIRKVYQRAVVTPMLNLEALWREYNSFEQSVNKALAKKLIDDKTREYMNARRVAKEY
EAITRGLVRGNPSVPINGSSEENKQLQIWKKYIAWEKSNPLRTEDTALLTKRVVYAYEQC
LQTMGFHSNVWCEAALYLEKVSQQLMDKGDMQGSKVLSDETAGLYERAVTGLMKHNMLLY
FAYADFEEGRMKFQKAKEIYEKYLALENIDPTLVYIQYMKFARRSESIKESRAIFKRARE
DSRTNFHVFISAALMEYYCSKDKSIAFKIFELGLKKHMNETDYVLAYVDYLSHLNDDNNT
RVLFEKVLSSMPNEKASDVWGKFLEFEGTCGDLASLVKVENRKLEAYREELEGLEISVLV
DRYKYLDLFPCTPLELKIMGYVGLTRQNNSLSSILSSVTAQDEKTEEKPLKFPRPDTSQM
TPFKPTAGAVGVHSVPGGVFPIPPAAQHLMTLLPPPTCFQGPFVMVEDFIRLTLESQLPD
PPTSGLPDVELPVNGIDDGEENMDVEQQKRGIKRQGDHESDDEGNSVAPPVNDIYRTRQQ
KRVH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaatggagaagcatttgggaatggcgcagatgaacgtctcgttaattcagat
ccaaaggatggaacggtaactttttggagtaaaactgaacgtggaataaaggcagaaaca
cggttgcagaaccatccttatgacactgaatcttggggagttttgatcagagaagctcag
agtactcctttggaaacctcaagagtgctatgcgaaaagcttgttagacgattcccaaat
gctggccggtactggagattgtacattgagcaagagataaaaaataacaactatgaacaa
gtagaaaagcttttccagaaatgtctcatcaaggtgttaaatattgatctctggaagtgt
tacttgtcttatgtaagggatacaaagtgttccctcccaaattttagagataaaatgctg
caagcttatgaatttgccctggagaaagtcggtgtagacttcaactcttaccagatttgg
attgactttgtgaactttctgaagacaggagaggcagttggcagctatgctgaaaaccgc
aagattatcaccataagaaaagtgtaccagagagcagtggtgactccaatgttgaattta
gaggctttatggagagaatacaactcatttgaacaaagtgtaaacaaagccttagccaaa
aaactaatagacgacaagactagagagtacatgaatgccagaagagttgctaaggaatat
gaagccataacaagaggcctggtcagaggaaatccatcggtaccgattaatggaagttcg
gaagaaaataaacagttgcaaatttggaagaaatacattgcatgggaaaagagcaaccca
ctgagaactgaagacactgcactgctgacaaagagagttgtttatgcatatgaacaatgt
cttcagaccatgggatttcattctaatgtgtggtgtgaagcagcactttatctggaaaaa
gtcagtcaacagttgatggacaaaggggacatgcagggttctaaagttctcagcgatgaa
acagctggattatatgaacgagcggtcacaggactgatgaaacacaacatgttgctgtac
tttgcctacgctgactttgaggaggggagaatgaagtttcagaaagcaaaggaaatatat
gaaaaatatttagctctggagaatattgatccaactttggtgtatatccaatacatgaaa
tttgctagacggtcagaaagcatcaaagagagccgagccattttcaagagagcgcgcgag
gattcaagaaccaattttcatgttttcatttcagctgctcttatggagtattactgcagt
aaagacaaatcaattgcatttaaaatttttgaactaggtttaaagaaacatatgaatgaa
acagactatgtgttggcctatgtagattatttatcacatttaaatgatgacaacaacaca
agagtgctttttgagaaagttctcagttccatgccaaatgaaaaagccagtgacgtttgg
ggcaaatttctggaatttgaaggcacatgtggtgacttagccagcttagtcaaagtggag
aacagaaaactagaagcctacagagaggaactagaaggccttgaaatatcagtgcttgta
gacagatacaagtatctggatctctttccttgcactcctctagagcttaaaattatgggc
tatgtgggattgacaaggcaaaacaacagtttgtcaagcattctttcctcagtaactgct
caagatgagaaaacagaagagaaaccattgaaatttcctcgaccagacacatcacagatg
acaccattcaaaccaacagcaggagctgtaggtgtccactcagtaccaggtggagttttt
ccaattcctccagcagctcagcacctcatgactctgttgcctcctccaacttgctttcag
ggtccatttgtaatggtggaagacttcatcaggctgacattggaatcccagttacctgat
ccaccaacctcgggtttaccagatgttgagcttcctgtgaatggtatagatgatggtgaa
gagaatatggatgtagagcagcaaaagcgtggaattaaaagacaaggtgatcatgaaagt
gatgacgaggggaactctgttgcccctcctgtgaatgacatctacagaacccgtcaacag
aagagagtccattag
DBGET
integrated database retrieval system
