KEGG   Acropora digitifera (stony coral): 107336855
Entry
107336855         CDS       T04352                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107336855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adf03041]
    107336855
Spliceosome [BR:adf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107336855
 Complex C
   U5 SnRNP specific factors
    107336855
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 ANAPC4_WD40 WD40_RFWD3 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd eIF2A Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 107336855
NCBI-ProteinID: XP_015757414
LinkDB
Position
Un
AA seq 348 aa
MASKRKFNGDTSQALVPVKKQKQHQVALLNHEGVIQELPQRTSSLDAPIMLLSGHEGEIF
TARFHPSGETLASAGFDRLIYLWNVYGECENFAVLKGHTGAVMELHFSLDGSTMFTASTD
KTLGIWDFETGTRIKKLKGHTSFVNSCFPSRRGPQFIVSGADDCTVKLWDTRKRGCAQTF
QNVYQVTAASFNDTSDQVISGGIDNEIKVWDLRKNDVLYKMSGHTDTVAGLRLSPDGSFI
LSNAMDNTVRMWDIRPFAPLERCLKVFTGAQHNFEKNLIKCSWSPDGLMISSGSADRFVY
VWDTNSRRILYKLPGHNGSVNDVDFHPNELILMSCGSDKKIYLGELQA
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggcgtccaagcgtaagtttaacggtgacacaagtcaagcccttgtccctgtgaagaag
caaaaacagcaccaggtagcgcttttaaaccacgaaggagtcatacaagagctccctcaa
agaacctccagtctcgatgcgcctattatgctgcttagtggacatgagggagagattttt
acggcaagattccatccctcaggagaaactttagcatctgcagggtttgatcgcctaatt
tatctttggaatgtatatggcgagtgcgaaaattttgctgtacttaaaggtcacactgga
gcagtcatggaacttcacttttctttggatggaagtacaatgtttacagcctccacagac
aaaactttaggaatttgggattttgaaacaggcacaagaataaaaaagctgaagggtcat
acctcatttgtaaacagttgttttccttcaagaagaggtccacagtttattgttagtggt
gctgatgactgcacagtcaagttgtgggatacaagaaaacgaggttgtgcacaaacattc
cagaacgtatatcaggttacagcagcatccttcaatgatactagtgatcaagttatttct
ggtggaatagataatgaaattaaggtgtgggatcttaggaaaaatgatgtcttgtacaaa
atgtcaggacatacggacacagtcgctggtcttcgacttagtcctgatggctcttttata
ctttccaatgcaatggataatacagttcgcatgtgggacattcgtccatttgctcctctg
gaaagatgtttgaaagtgttcacaggggctcagcataactttgaaaagaatttgatcaag
tgttcttggtcacctgatggacttatgatatcttctggatcagctgatagatttgtatat
gtgtgggatacaaactcaaggagaattctttacaaactaccaggacacaacggttcagtg
aatgatgtagacttccacccaaatgaactaattttaatgtcttgtggaagtgataagaag
atctaccttggagagttgcaagcctaa

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