Acropora digitifera (stony coral): 107337467
Help
Entry
107337467 CDS
T04352
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
adf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107337467
09124 Replication and repair
03420 Nucleotide excision repair
107337467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107337467
03400 DNA repair and recombination proteins [BR:
adf03400
]
107337467
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107337467
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107337467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
107337467
NCBI-ProteinID:
XP_015758109
LinkDB
All DBs
Position
Un
AA seq
478 aa
AA seq
DB search
MADRETILLEVINTKHKKNGGVLRLLSNTLAWFPHGSDSPKLSCAYSEIKDAPHALRKFN
TLSALLLNPVKGERRRKTDSFLTDLDIQAVQTDQAIGLSSALLADMQPESSGCNEVKYNL
NVDTIEAIFKTYPAVKKKHQEVVPHEMPEKDFWTKFFQSHYFHRDRVSSRPTTGDMFTEC
AKEDEHEQLKRRLAALKDPLLDLTGASPVPDEGYGQAAELVDSKNSTASQGLFRRLNHHS
LMVLETSTDRSSTSAEDNKSVENGHAEDGIPPAKKRRLREMVEFDDLTEEQVTDLPSLKI
ADSTKFSEGLIPVVTKDQGSLHAKRCFTDNSVALKGSRSEVEHWQPNLPGALPSAMACHV
LTEMSPGGSLMSTTSETSMQHLVPSSLQKELKSQYNSLSELLRHFWSCFPVKTQLLEDKM
VRIGQSLEKYRDAKLQQFRSQLPSENSHLANHLVEMLDSALFKYRTWLEKKSASRLTR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaaactattctccttgaagtgataaatacaaagcataaaaagaatggt
ggagtgctgcgcctcctttcaaacaccttagcctggttccctcatggctcagatagtccc
aagctttcctgtgcatactccgaaataaaagatgcaccacatgccctcagaaaattcaat
actctgtcagctttacttctaaatcctgttaaaggagaaaggcgcagaaaaacagatagt
tttcttactgatttggatattcaagctgtgcagactgaccaggccattggattgtcctca
gcattgcttgcagacatgcagcctgaaagctctggctgtaatgaagtaaaatacaactta
aatgttgacacaattgaagcaatattcaaaacttatcctgcagtaaagaagaaacatcaa
gaggttgtacctcatgagatgccagagaaagacttctggacaaagtttttccaatcccac
tacttccacagggacagagtgagctcaagaccaaccactggcgatatgttcacagagtgt
gcaaaagaagatgagcatgaacaactaaagagaaggcttgctgcattgaaggatccattg
ctggacttgactggtgcttcaccagtccctgatgagggctatggacaggcagcagagctt
gtagactccaagaacagtactgcaagtcaaggcttgtttagaaggctgaaccatcacagc
ttgatggtacttgaaacttccactgataggtccagcacatctgctgaagataacaaaagt
gttgaaaatggtcacgcagaagacggcattcctcctgctaaaaagagacgtttacgcgag
atggtggaattcgatgatttgactgaagagcaagttactgacctcccaagcttaaaaatc
gctgactcgaccaaattttctgaaggtcttattcctgtggttaccaaggatcagggatct
ctgcacgccaaacgatgctttactgataattctgtagctcttaaaggtagccgaagtgag
gtggagcattggcagcccaacctacccggggctctacctagtgccatggcttgccatgtg
ctcacagagatgtcgccaggaggatccttaatgagcaccacttcggaaacaagtatgcag
catttagtcccctcgtctcttcagaaggagctcaaatcgcaatataattcgctgtctgaa
ttgcttcgacatttctggtcttgctttcccgtcaagacgcagttactggaagataagatg
gttcgtattggccagagtcttgagaaatacagagatgccaagttgcaacagtttcgcagt
cagctaccgagtgaaaattcccacttggcgaaccatttggtagagatgcttgattctgcc
ctctttaaataccgaacatggctggagaaaaagtcagcttctaggttgacccgctga
DBGET
integrated database retrieval system
