Acropora digitifera (stony coral): 107338105
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Entry
107338105 CDS
T04352
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adf03036
]
107338105
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107338105
microRNA pathway
RISC loading complex
107338105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
Dicer_platform
Dicer_dimer
PAZ
Dicer_PBD
dsrm
Motif
Other DBs
NCBI-GeneID:
107338105
NCBI-ProteinID:
XP_015758828
LinkDB
All DBs
Position
Un
AA seq
1874 aa
AA seq
DB search
MSRGRHKRDEIVQQFVNATLHQSMLSAKTYFDEKGTTNKRTGHLSSCNFDIIVTKGKNFK
GILQTGLMDTMSINLIVFDKCHLVCYPDHPYIALLRYLGGCEFDSRLKIIGVSSQIEQYQ
SCPQDLEMFLSALEKHFCCKVSISNGLLALNRFEEQVLDEAVYYTCAQGDEDELTCKLME
VLQSSLVFMKDIQGLESSGESIAFVKHVFTDFCQILLLFGPVSLTSASGMVLKELKKLEK
KCSPESFDLLTLQYCRTQMNLMLKLSARAKFGLSDLNYPDMTKKLLYCMSKHLKPEDNES
FNCVDTGCDKGIIVSSSSQSQINAATSTTILCLQQQQSLNPVAMATPQHKHTVLSQPMKL
QSACVKTNCNDPLCIVLVPSAIIAKALNSLINKLADNRPDYSFLKSAFIDSKKTKQRLSL
ESEDNVMECIQDGSVNIVVTTFEVEKEINVRRCNILIRLGMPKEYNSFLNVKKKVKSAGA
KAVFLLKEEEKSKAKARFEVFHKIEQILVEKCRNTSRPPCHEIQQVLLNEPLESNSYKPY
GEEGSKVDLFSSISLINSYCSKFPSSGVGFPVPICRTEATWTDCNVELMSTLYLPRNSPV
YWPIRAGLTLNRDKINKASLLKARRKSEMLVALETCRQLHKAEELDEDLQPFFRFKKFNL
IAENEKCNCEIADNGIGMDGSVQRKRAYTKKFPSILENNFPVSGEPSYLYSITLELTKPW
MFERAVRSQSIAQSSGTSYSLGILSRKTLPKLPAMVVFDRAGEVTATIRECKINPFVPNC
YQLALIQRFTGFIFKDIAKPGSAPKKPFPKFDPNSAASGYLIVLLKNSETKIRSRANEPD
QREIAFDFMQSVERDLGSFDNPTDPPPVGVEDMTKFTDAVVTGIHNDKRLRYYVAGICYD
RSPLDPFPNPSAAATFAEYYHKKYGFQVCLDQPLLDVDHISSRLNFLVPRYQTIRGHDLS
VPDKDSKRSHKAKVHMLPELCSIHPLPGYLWRQLFVLPAVLYRMESLLLGEELRSFFARA
LGRGAVEWPNEVPLPILTMGDLVGEEILTRSYSSGENSKEDVHSDGVVPVPLTLQPAKFS
SKETFWCDPVPGERKDKLSSFHFTGTMALQRDFAEEEKEQKTDFKVMKSTENLSDAEMGD
TTETLPQHKELCNRVTNIHVSEEDNVNVVSNVNYLMSQNKDKYNFIDEPSLSSCFVIPKK
EESNLLEADQVCTQIHVDHDKPLHTNIDETPRFIWTDPCLSSLYRTCGPSSTLLLRALSP
SSASDVYSLERLEMLGDSFIKYAVSTSVFFQQPHENEGKLSFFRGLKVCNRQLFYLARKR
GLPSYLFPHMFSILFNWLPPGFYYENSDNIEGASDNQLLLMPDKVSQEHQEEDDEEGSLF
LQGDLSEESGNRGDPATSEVHSASIQLNPILHHCCSDKAIADSVEALVGAFLLSLGLEGA
WSFLEWLGMDLNKQEIRDAHTQGAPCGHDSSVEETKEFDSIESKQSMSKIPCGTGQTSCE
SQPNLSRDFSCDRSSDTQMMPQDEAPENCCKDIAETSCQRKNQSFPEMLHDHSTKGSLSN
AVKTSLEHISKSQPSFHEADNSCLAAKSILLPLNSNRAFRPCDRSFASEFVEVEEALNYK
FHNRLLLEQAFTHTSLPRDYNSVRSSYEQLEFLGDALLDFLITHYLYLYHRNMSPGVLTD
LRSAVVNNFSFAALAVKLGFAKHLQSLSPPLFDVVNKFIEKLEEKEMKEQQGNYYQIYSS
VFVLGDEEGGDFVEVEVPKVLGDLFEAVAGALYVDCGEDVAKVWEIYLPILKPSIDYYAA
HPPLSAIRELLEKKPNAAKFAPVERLVDGTFRICLTVTGLGTFVGIGRNVRIAKSAAAQR
ALATLRKHQNAKQS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggggaggcacaagagagatgaaattgttcagcagtttgtgaatgccaccctt
catcagtcaatgctctcagcaaaaacctattttgatgaaaaaggtactacaaacaaaagg
acaggtcatctttcaagttgtaattttgatatcattgtcacaaaaggaaaaaatttcaaa
ggcattttacagactggactaatggatacaatgtcgatcaatttaattgtttttgacaaa
tgccatcttgtttgttatcctgatcatccttatatagcccttttgcggtatcttggaggg
tgtgagtttgattcaaggttgaagataatcggtgtttcgtcacaaattgaacagtatcaa
tcttgtcctcaagacctggaaatgtttctcagtgcactggaaaagcacttctgctgtaaa
gtttctatttctaatggcttattagctttgaacaggtttgaagaacaggttctagatgag
gctgtttactacacctgtgcacagggtgatgaagatgaattaacatgcaagctcatggaa
gtccttcaaagtagccttgtattcatgaaagacatccaaggcttggaatcctctggagaa
agcattgcatttgtgaaacatgtctttactgatttttgccaaattcttctgttgtttggg
ccggtatctcttactagtgcctctggtatggtcctgaaagagttgaaaaagcttgaaaaa
aagtgtagccctgaaagttttgatttattgaccttacagtattgccgaacacaaatgaat
ttgatgttgaagttgtcagcacgggctaaatttggattgagtgacttaaattaccctgat
atgaccaaaaaactcctatattgcatgtcaaaacatttgaaaccagaagacaatgagagt
tttaattgtgtggacactggttgtgacaaaggaattattgtttcatcaagttcacaatcc
caaattaacgctgcaacttcaaccacaattttatgcttacaacagcaacagtcattgaac
cctgttgccatggcaactccacagcataagcacactgttctctctcaaccaatgaaattg
caatcagcatgtgtcaagaccaattgcaatgatccattgtgcattgttcttgtgccaagc
gcaatcattgcaaaggcgttgaactctctgattaataaactagcagataacagaccagac
tatagcttcttgaaaagtgctttcatcgatagcaagaaaactaaacagagattgtctctt
gagtcagaggataatgtaatggagtgtattcaagatggatctgttaatattgttgtcaca
acgtttgaagtagagaaggaaattaatgtgcgcagatgtaatatattaatacgacttggc
atgccaaaagaatacaatagcttcctcaatgtaaagaaaaaagtaaaatctgctggtgcc
aaagctgtttttctcttgaaggaagaggaaaagtccaaggcgaaggcgagatttgaggtt
tttcataagattgagcaaatcttggttgagaagtgccgtaacacgagcaggccaccatgt
catgaaattcagcaagtattgctcaatgagccccttgaaagtaacagttacaaaccttat
ggagaggagggatctaaggtggacctattttccagcatatcacttatcaacagttattgt
tccaagtttcccagcagtggcgttggttttccagttcccatttgtagaacagaggctact
tggactgactgcaacgtggagcttatgtcaaccctttacttgcctcggaactcccctgtt
tattggcccatacgagcaggtttaacactcaatagagataaaataaacaaagcaagtcta
ctgaaggcaagaagaaaatcagagatgcttgttgccttggagacctgtcgacaactgcac
aaggcagaggaacttgatgaagatcttcagccctttttcaggtttaagaagttcaatctg
atagcagaaaatgaaaaatgcaactgtgagattgcagacaacggcataggaatggatgga
tcagtgcagaggaagagagcttacaccaaaaagtttccatccatcttagagaataatttt
cctgttagtggagagccaagttatttgtattccatcactttggaattgaccaagccttgg
atgtttgaaagagctgtcaggtcacagagtatagcacagtcttcaggcacatcttacagt
cttggaatactctccaggaaaaccttaccaaagcttccagcgatggtagtctttgacaga
gctggagaagtaactgctactatcagggaatgcaaaattaatccattcgttccaaactgt
tatcaactcgcgcttattcagagatttactgggttcatcttcaaggacatcgccaaacca
ggaagcgcccccaaaaaaccgtttccaaaatttgaccccaactcagctgcgtctggatac
ttgatcgtgcttctgaagaattccgaaaccaaaattcggtcccgtgcaaatgaaccagat
cagagagaaattgcctttgattttatgcaatctgttgagagagaccttggtagctttgac
aatccgaccgacccaccccctgttggtgtcgaagacatgacgaagtttaccgatgccgta
gtgacgggaattcacaatgacaaacgtcttcgctattacgtggcgggcatttgctatgat
cgcagtcctctcgatccttttccaaacccaagtgctgcggctacatttgcggaatactat
cacaaaaagtatggttttcaggtgtgtttagaccaacccttgttggatgttgatcacatc
tcatcgcggctgaattttctcgtccctcgctatcagaccataagagggcatgatctctcc
gtgcctgacaaagattcgaaacgatcacacaaagccaaagtccatatgcttcctgagttg
tgttccatccatcctttgcccggatatttgtggcgacaactatttgttttgccagcggtg
ttgtatcgcatggagtcccttctgcttggtgaagagctgagatcctttttcgctcgggcc
cttggtaggggtgctgtggagtggccgaatgaagtgcctcttccgattttgacaatgggt
gacttggtaggtgaggaaatcttgacccgaagttattcgtctggggagaattcaaaggaa
gacgtccattccgatggggtcgtgcccgtacccttaacacttcagcccgcaaaattttca
agcaaggagactttttggtgtgacccagttccaggcgagcgcaaagacaagttgagttct
tttcacttcacgggaacaatggcgttgcagagagattttgcagaagaggagaaagaacaa
aaaacagatttcaaagtcatgaaatcaacggagaatctctctgatgcagaaatgggagat
accactgagaccctgccacaacacaaggagctgtgcaacagggttaccaacatacacgtt
tcagaagaggacaacgttaatgtggtatccaatgtgaactatctgatgtctcaaaataaa
gataagtataattttattgacgagccaagtttgtcttcttgtttcgtgatacccaagaag
gaggaatcaaatcttttagaggcagatcaagtttgcacacaaattcatgttgatcatgat
aaacctttgcatacgaacatcgacgaaacgccccgctttatttggacagatccttgtctt
tctagcttgtatcgaacctgcggcccttcgtcaactttgcttctccgtgcactatcgcca
agctcagcctccgatgtgtattctcttgagagactggaaatgctcggcgattcattcata
aaatacgccgtctctacctcagtcttctttcagcagccccatgaaaacgagggcaagctg
tccttcttccgtggactcaaagtctgcaatagacagctgttttatctggcgcggaaacga
ggcttgccttcgtacctctttccacacatgtttagcattctatttaactggctgcctccg
ggtttttactatgaaaacagcgacaacattgagggagcgagtgataaccagttgttgctt
atgccggacaaggtctctcaagagcaccaggaagaggacgacgaagaggggagcttattt
ttgcagggggacctttcagaggagagtggcaaccgtggcgaccccgccactagcgaggtc
cattcagcaagtattcagttgaaccctatcttgcatcattgttgctccgataaagctatt
gctgactccgttgaggccctggtcggagcgttcctgctgagtttgggtcttgaaggagcc
tggagctttctcgagtggttgggtatggacctaaacaaacaagaaattcgagatgcacac
actcaaggtgctccgtgcgggcatgactcttccgttgaagaaacaaaagagttcgattct
atagaaagcaaacaatcgatgtcgaaaataccctgtggtacgggccagacttcgtgtgag
tcgcagccaaacttgtcacgtgacttctcttgtgatagatcgtcagatacacagatgatg
cctcaggatgaggcccctgaaaattgctgcaaggatatcgctgagacaagctgtcaaaga
aagaaccaatcttttccagagatgctacacgatcacagcacgaagggatcgttgtcaaac
gcagtaaagacatctcttgaacacatatcgaagtcccaaccgagttttcatgaagctgac
aactcctgccttgcggcaaaatcaatccttcttcctctcaattctaaccgtgctttccgc
ccatgcgacagatctttcgcttcagaattcgtggaagttgaagaggcgctaaactacaag
ttccacaaccgtttactccttgaacaagctttcacgcacacttccctccctcgagactac
aactctgtccgctccagctacgaacaactggagttcttaggagatgcactcttggacttt
ctaatcactcattatttgtacttgtatcacagaaacatgtcccctggagttcttaccgac
ctgcgctcggctgtggtgaataacttcagttttgcagctctggctgtgaagttgggattc
gcgaaacacctacaatctctgtcacctcccctttttgatgtcgtgaacaagtttattgag
aaattagaggagaaggaaatgaaagagcaacagggaaactattatcagatttattccagt
gtctttgttcttggcgatgaagaaggtggtgactttgttgaagtagaggttcccaaggtg
ctcggtgatctgtttgaagctgtagcaggagcattgtatgtggactgtggggaggatgtt
gctaaagtctgggaaatttatcttccaatactcaagccctctattgattactacgcagcc
catcctcccctgtcggcaatcagggaacttctggaaaagaaaccaaatgctgccaagttt
gcacctgttgaaagactggtggatggtacatttaggatctgtctgactgtgacaggttta
ggaacttttgttgggatcgggagaaatgtccggattgcaaaatcggccgctgcacagaga
gctctggctactttgcggaagcatcaaaacgcaaagcagagttga
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integrated database retrieval system
