Acropora digitifera (stony coral): 107338262
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Entry
107338262 CDS
T04352
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
Organism
adf
Acropora digitifera (stony coral)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107338262
NCBI-ProteinID:
XP_015758979
LinkDB
All DBs
Position
Un
AA seq
1674 aa
AA seq
DB search
MDKDTDDGQDDPVCHALDKCVKNQLKNVDKKEARGRAVAKNITNFRHQIIKDFMSTYMTF
KTCFCPVCGTPSRDVRSEHNTSLFLKGLSFRMANKWLLSKTHKERDSDAHDGSEEKHKDI
QEVPKGDEKDSQIKELMQQIYLTPTEAKEQIFKIWENHGDFLDILLGAYPSPTARRKRSS
ADMFFFEVFPVPPSRFRPLSTLGDKRFENPQSGNLVKILKDCALLKECLASVKNSATAEE
EQQPAIVKDEVKPAKKKKIFGKSAPDITNGKSPMERLHNAWLKLQTDVNCCIDSDLDKLS
SVKFPGIRQILEKKEGLFRKHMMGKRVNYACRSVISPDPYMNVNEIGIPEVFALKLTYPQ
PVTHWNVKELRQAVINGPLQHPGATLVEQEDGKRTLLSMTNPNQREAIAKRLLTPSTGVK
TVSPCKKVYRHLQNGDVLLLNRQPTLHRPSMMAHKVRVLRGEKTIRLHYANCKSYNADFD
GDEMNAHFPQNELARAEAYHLASTNYQYLVPKDGTPLGGLIQDHIVAGVRMTVRGQLFSR
SDYQQLVYSALSFKNIKIKLLKPCIYKPRQLWSGKQVVSTVLINLIPPEVDRLSICGKAK
IAGKNWMNGNPRNRSLGIPLLKGDDMSEAQVVIRQGELMCGVLDKAHYGPTPFGLVHCCN
ECVGSRLVLEQKLREVHHNKDGYEMKQLDLSMKKKTDHYQDLINKACIPLGLLKRFPDNN
LQLMVQAGAKGSSVNCMQISCLLGQIELEGRRPPIMLSGRSLPSFLPYDTSPRAGGFVDG
RFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGLQVGYDLTVRDSDGS
VVQFYYGEDGLDVMKTPFLSEKQFPFMVDNFKIFLDQVNPHELLPHLEADKAAKLEEKIG
KWRRKHADDQQNRKSPFLCFAQDSTKARRNAESEEETQKYGRTKADLKLFKMWRKAPVDV
RERYTKKTAGCPDPVLSNRQADRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLG
SQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLG
SQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDSLG
SQRHECDSLGSQRHECDSLGSQRHECDSLGSQRHECDTLSMLLLIVLFIKLNKLGSIGEP
STQMTLNTFHFAGRGEMNVTLGIPRLREILMTASERIKTPRMDLPVKPGSKAKKRAKRLQ
RTFTKVRLAQVLESVDVWESLSSNEESNRERLHRVRFNFLSESSYKDEFCVKAGRILHYM
ESHFINKLTKAILKEFHVKNSTSVIDFSKDNDQPRENNDKAVAQDDDDDNAELSDEEAAD
GDANEAKQRQRRQQHASYEAPDEDEENELTAFQHEEEQDTNEVSSIRTESIYGDEGSVND
VSSREEIEEATRQSRVFSSRVERVQVLNDHVASYTYDVDKEEWCEVCLKFPVADFKIRVA
SIVEKLANQSVVYEIPGINRCFLIEDKDEAVLKTEGVNIQAAWKHEDILDLTKIYTNDIQ
AMANTYGIEAAGKVIRQELKSVFSAYGIQVDPRHLSLVSDYMTYEGTVKAFNRVALDSNS
SPFQKMSFETTTHFLRGAVLTGDTEKLSSPSSRLVVGRVVGSGTGCFELMQPLY
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagatactgatgatggacaagatgatccagtgtgccatgctctggacaaatgt
gtgaagaatcagttaaagaacgtagacaagaaagaggccagaggccgagcagtggccaaa
aatatcacaaacttccgacatcaaattatcaaagattttatgagcacttacatgactttt
aaaacatgtttttgtccagtttgtggtaccccttcaagggatgttaggagtgaacataac
acttctttatttctgaaagggctgtctttcagaatggctaataagtggttactgtctaaa
acacataaagaaagagatagtgatgcacatgatggctctgaggaaaaacacaaagatatc
caggaggttcccaaaggggatgaaaaagatagtcaaataaaagagctcatgcagcagata
tatctaacaccaacagaagctaaggaacaaatttttaaaatctgggaaaaccacggtgac
tttcttgacattctacttggagcatatccttcgcctacagccagaaggaagcgttcatca
gcagacatgttcttttttgaagtcttccctgttcctccctcaagatttagaccactttca
acacttggtgacaagcgctttgaaaatccacaaagtggaaacctggtcaagattttgaaa
gattgtgctttattaaaggagtgtttggcaagtgttaaaaattccgctacagcagaagag
gaacagcagcctgcaatagtgaaagatgaagtgaaacctgcaaagaagaagaaaatcttt
ggtaaaagtgctcctgatatcaccaatggaaagtcaccaatggagagacttcacaatgcc
tggctaaagttacaaacagatgtgaattgttgtatagacagtgatctggataaattatca
tccgtcaaatttccaggaataagacagattcttgagaaaaaggaaggattgtttcgtaaa
cacatgatgggcaaaagagtgaactacgcctgtcgatctgttatttcaccagacccttac
atgaatgtgaatgaaatcggaattccagaggtttttgctttgaaattaacttatcctcaa
ccagttacccattggaatgtcaaggaattaagacaagcagtcattaacggtccccttcaa
caccctggcgctacccttgtggaacaagaagatggcaaacgcactctgctcagtatgact
aatccgaatcaaagagaagccattgccaagcgtcttctcactccatccacaggcgttaaa
acagttagcccttgtaaaaaggtttatcggcaccttcagaatggtgacgtgttgttgtta
aacaggcagcccactttacacagaccgagtatgatggcacacaaggttcgcgttctccgg
ggagaaaaaaccatccgacttcactacgctaactgcaaatcgtataacgctgattttgac
ggcgacgagatgaatgcacactttcctcaaaatgaactggccagagcagaggcctaccac
ttagccagcactaattaccaatacttggtacccaaagatggaacaccgttgggcggactt
atccaagatcatattgtagctggcgtgagaatgacagtaagaggccaattattcagcagg
tccgattatcagcagcttgtgtacagcgctcttagttttaaaaatatcaaaataaaatta
ttgaaaccatgcatctataaacctcgtcaactctggtcaggcaaacaggtagtgtctaca
gtccttatcaatctgatccccccagaggtcgatcgtctgagcatttgtgggaaagcaaaa
atagcaggaaagaactggatgaacggaaacccaaggaatcggtctctcggaatccctttg
ttgaaaggcgatgacatgtcagaagctcaggtggtgatccgccagggtgagctcatgtgt
ggcgtgttggacaaagcgcattatggacctacaccatttggtttggttcactgctgtaat
gagtgtgttggctccaggcttgttttggaacaaaagctacgggaggttcaccacaacaaa
gatggctacgagatgaaacaactcgacctcagcatgaagaagaaaacagaccattaccaa
gatctcatcaacaaagcctgtattcccttgggtttgctcaagagatttccagacaacaat
cttcaattgatggttcaagcaggtgccaagggatcctcagtgaattgcatgcagatatcg
tgtcttcttggtcagattgaactcgagggacgtaggcctccgatcatgctcagcggcagg
tccttgccatctttcctgccttatgataccagtccaagagctggtggcttcgtagacggc
cgcttcttaacggggattcggcctcaagagtatttctttcactgcatggctggacgagag
ggcctcgtggacacagctgtcaaaaccagtcgaagtggttacctgcagcgatgtcttatc
aaacacttggaaggtttacaagtcggttatgatctgaccgtacgcgatagcgatggctca
gtggtgcagttttactatggcgaggatggtctggatgtcatgaaaacgcctttcctgtcg
gagaaacaatttcctttcatggtggacaattttaagatcttccttgatcaagtaaaccca
cacgaacttcttcctcatcttgaagcagacaaggcagcgaagcttgaggaaaagattggc
aagtggaggagaaagcacgcagatgatcaacaaaacagaaaatccccgttcctttgcttc
gcacaagacagcacgaaagctagacgcaatgcagaatcagaggaagaaacgcaaaaatat
gggcgcacaaaggcggatctaaaactgttcaaaatgtggaggaaagcgcccgtagacgtt
cgtgaaaggtatactaagaaaaccgcaggttgccctgatcctgtgctgtccaatcgtcaa
gctgacaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgatagtttagga
tctcaaaggcacgagtgtgatagtttaggatctcaaaggcacgagtgtgataccctttca
atgctgctgcttattgttcttttcataaaattgaataaactaggttccatcggtgaacca
tccacgcagatgacacttaacacttttcacttcgctggtcgcggtgagatgaacgtcaca
ctgggaattccaagactaagggaaatattgatgacagcgagcgagcgtatcaagacacca
aggatggaccttccggtcaaaccaggttctaaagcgaagaagcgtgcaaaacgattgcaa
aggactttcaccaaagttagattggcgcaggtactggagtcagttgatgtttgggaatct
ttatcgtctaacgaagagtcaaacagggagcgattacaccgtgtccggttcaactttctt
agtgaatcgtcctataaggacgaattttgtgtgaaagcgggacggattcttcattacatg
gaatcccatttcatcaataagttgaccaaagccatcttgaaagagttccatgtgaaaaat
agcacaagtgtaatcgatttttcgaaggacaatgaccagccgagagagaacaacgacaag
gctgtagcccaagatgatgatgacgataatgccgagctgtcagatgaggaggccgctgat
ggcgacgctaacgaagccaagcaaagacaaaggcgacaacagcacgcaagctacgaggcc
cctgacgaagatgaggaaaatgaacttacggcattccagcatgaagaagagcaagatacc
aacgaggtttcaagtataaggacagaatcaatttacggggacgaagggagcgtcaatgat
gtatcaagtcgagaagaaatcgaagaagccacacgccagtcgcgcgttttcagttcgcga
gttgagcgtgttcaagtgcttaatgatcacgtggcttcatacacttatgacgtcgataaa
gaagagtggtgtgaagtttgcttaaagtttcccgttgctgacttcaaaataagagtagct
tccatagttgaaaaactggccaatcagagtgttgtttacgaaataccaggcattaaccgg
tgctttctgatagaagataaggacgaagcagttctgaaaacagaaggcgttaacatacag
gctgcttggaaacatgaggatatacttgacctgacaaagatatatacaaacgatattcaa
gccatggccaatacttatggtattgaagcagctggaaaagtgataagacaagaattgaaa
agcgtcttcagtgcttatggaattcaagtggatccacgccacctcagcctcgtgtccgac
tacatgacttatgaaggaaccgttaaggccttcaatcgcgtcgcactcgattcaaattct
tctccttttcagaaaatgagttttgaaaccacaacgcacttcctgcgcggagccgttctg
actggggacacagagaagctgtcttcaccttcgtctcgtctggtcgttggtcgtgtcgtt
ggcagtggtacaggctgctttgagttaatgcagccgctgtattga
DBGET
integrated database retrieval system
