Acropora digitifera (stony coral): 107339980
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Entry
107339980 CDS
T04352
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107339980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107339980
03036 Chromosome and associated proteins [BR:
adf03036
]
107339980
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107339980
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107339980
PBAF complex
107339980
GBAF(ncBAF) complex
107339980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Chromo
Myb_DNA-binding
Myb_DNA-bind_6
SpeFL
Motif
Other DBs
NCBI-GeneID:
107339980
NCBI-ProteinID:
XP_015760824
LinkDB
All DBs
Position
Un
AA seq
1190 aa
AA seq
DB search
MAARKKDGAPDWKYYETAETAALFEPVKQYLLKNCKKYVQMEPPTNKTLATLTAQLLQFQ
EDNFGKDVSKQALLTKLPMKMFMDYSSGGSLCVILANVFKTKMEQGWRRFDFQSPSRMDR
NVELFLNIEKALKEAKLLTVPQVYIMPDIDAKLAAKLRDIVKRHNGAITDDKAAATHVVH
EPPPPFPEDEWLRPLLKQDNQVLVHWWYYPDSYDTWVPSGNIEDEPQPEPQHQGPWQVNA
RWLSDLDVFNEWMNEEDYELADTDGSGNKRETSPALGKTRRKSLRPGTSSDEQPGSPDGG
IFFAKLLTVPQVFIMPDIDAKLAAKLRDIVKRHNGAITDDKAAATHVVHEPPPPFPEDEW
LRPLLKQDNQVLVHWWYYPDSYDTWVPSGNIEDEPQPEPQHQGPWQVNARWLSDLDVFNE
WMNEEDYELADTDGSGNKRETSPALGKTRRKSLRPGTSSDEQPGSPDGGKLKKRKRSPSP
DPKKKKKLVTPANPKKKSGKEEDNDRYKSDFFNQCEVEEVAGSTVSASKGKEIDLQPMKG
NALTDISESGKPDDGDGDEGESGSQMDTQEQTEESAEQSAPTSPSSSQQKDGLFKEPLSV
HDTEPHDENLTEQTHHIIIPSYASWFDYNSVHAIERRAIPEFFNGKNKSKTPEVYLAYRN
FMLDAYRLNPTEYLTATACRRNLAGDVCAVVRVHAFLEQWGLINYQVDADGRPTPMGPPS
TSHFHVLLDTPAGLQPLQPAKTQVQSIYNTVTTRAQVRVGCVSCFRSLFFQGLEMFKDDW
NKVAEHVGTRTQDECILHFLRLPIEDPFLEDVQLGPLCHQPVPFSQQGNPIMSTVAFLAS
VVDPRVASAAAKAALEKFSEMKEEIPQAVIDSHVKNATNRSEKRKVENATDENSSTEEKP
QPMEVNGSESTGADGGETGTQNVKMEESNEADKETENGDKSKTINEENIAKAAAASLAAA
AVKAKHLAQVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
ERQQFHQEQLKAAEIRARASSGHLSPSQSSPGQIQPQSQVSQPPPQFSQQQQVQIQPQQR
PSQQVSVVPTGQMPQVSSPAQPGQIGSNPPSASPSPAPPMNPGSVAQMGSLPASGCSTPV
SFIGSNAASPASGPGTPSSAPQGHASSGQVAHGPGDAVASPVPPPSGMME
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgtaagaaagatggcgctcctgattggaaatattatgaaacggctgaaact
gcggctctttttgagcctgtaaaacagtatttgcttaaaaactgtaaaaagtatgtgcaa
atggaacctccaacgaacaagacgttggccacacttactgcacagttgttacagtttcaa
gaagataactttggtaaagatgtcagcaagcaagcccttctcacaaagctacctatgaaa
atgttcatggattactcctctggtggaagtctttgtgttattcttgcaaatgtattcaag
acaaaaatggaacaagggtggaggagatttgacttccagtcaccttcacgtatggatagg
aatgttgaactcttcttgaatattgaaaaagctctcaaggaggcaaagttattgactgtc
ccacaagtgtatataatgcctgacattgatgccaaacttgcagcaaagctcagagatatt
gttaagaggcacaatggtgccatcactgatgataaagctgctgcaactcatgtcgtacat
gaacctcctccgccatttccggaagatgaatggttacggccactattaaaacaggataat
caggttcttgttcattggtggtattaccctgacagctatgatacttgggtcccatctggc
aatattgaggatgagcctcaacctgaaccccaacaccagggaccctggcaggtgaatgct
cgctggctttctgatcttgatgtgtttaatgagtggatgaatgaggaggattatgaatta
gcagatactgatggaagtggcaacaaaagagaaacttccccagcattaggaaaaacaaga
aggaagagtttgagaccaggaacaagttctgatgaacaacctggcagtccagacggaggt
attttctttgcaaagttattgactgtcccacaagtgtttataatgcctgacattgatgcc
aaacttgcagcaaagctcagagatattgttaagaggcacaatggtgccatcacagatgat
aaagctgctgcaactcatgttgtacatgaacctcctccgccatttccagaagatgaatgg
ctacgaccgctactaaaacaggataatcaggttcttgttcattggtggtattaccctgac
agctatgatacctgggttccatctggcaatattgaggatgagcctcaacctgaaccccaa
caccagggaccctggcaggtgaatgctcgctggctttctgatcttgatgtgtttaatgag
tggatgaatgaagaggattatgaattagcagatactgatggaagtggcaacaaaagagaa
acttccccagcattaggaaaaacaagaaggaagagtttgagaccaggaacaagttctgat
gaacaacctggcagtccagacggagggaaattaaagaaaagaaagaggtcgccctcacca
gacccaaaaaagaaaaagaagctggtaactccagcaaatcccaagaaaaagtcaggaaaa
gaggaagacaatgataggtacaaatcagactttttcaaccaatgtgaagttgaagaagtt
gcaggttcaactgtatcggcttcaaagggaaaagaaattgatctgcagccaatgaaagga
aacgcgttgaccgacatctcagaatcagggaaaccagacgatggtgatggagatgaggga
gaatcaggaagtcaaatggatacacaggaacagacggaagaaagcgccgagcagtcagcc
ccaacttcaccttcatccagccaacaaaaagacggattattcaaagaaccacttagtgtg
cacgacacagaaccacatgatgaaaacctgacagagcaaactcatcacatcattattcca
agctatgcttcttggtttgattacaacagcgttcacgccattgaacgaagagctataccg
gaatttttcaatgggaaaaacaaatccaaaacaccagaagtgtatctggcgtatcgcaac
ttcatgctggatgcttaccgtctcaaccccacagagtacctcacagcaactgcttgtcga
cgaaacttagctggagatgtgtgtgctgttgtcagggtccatgctttcttggagcagtgg
ggtctcatcaattatcaagtagacgcggatggtcgtcccacgccaatgggtcccccctcg
acttctcatttccatgtgttattagatacgccagcgggccttcagcctctccaacccgcc
aagactcaggtacagtcgatctacaataccgtaacaacacgggctcaagttcgtgtaggc
tgtgtttcatgctttcgttctttgttctttcagggactggaaatgttcaaagatgactgg
aacaaggtggcagaacacgttggaactcgaacacaagacgaatgcattttgcattttctg
aggctaccaattgaagatccgttcttagaagacgtccagctgggtcccttgtgtcaccag
ccagttccattcagccaacagggaaaccctatcatgtctacagtcgccttcttggcttca
gttgtcgacccacgagtggcaagcgcagctgccaaagcagctttggagaaattttcggaa
atgaaagaagagattcctcaggcagttattgacagtcatgtaaagaatgcaacaaatcga
tcagaaaaaaggaaggtagagaatgccactgatgagaattccagcacagaggaaaaacct
cagccaatggaggtcaacggaagtgagtcaacaggagctgacggaggagagactgggaca
caaaatgtgaagatggaagaatctaatgaagctgataaagaaacagaaaatggggataaa
tcgaagaccatcaacgaagaaaacatcgccaaagctgcagcggcttctctggcagctgct
gctgttaaagcaaagcatttggcacaagttgaagagagaaagatcaagagccttgtggca
ttgcttgtggaaactcaaatgaagaaactggaaataaaacttcgacattttgaagaactt
gagaccatcatggatcgggagcgcgaggcgctcgaataccagcgtcaacagctcctcgcc
gagcgccagcaattccatcaagagcaactgaaggctgctgagatacgcgcacgcgcatcg
tctggtcacttgtccccttcacagtcctcccctgggcagatccaaccacagtcacaggtt
tcccagcctcctccccaattctctcagcagcaacaggtgcagatacagccacaacaaagg
ccatcccagcaagtttctgtagttcccacaggccaaatgccacaggtctccagtccagct
cagcccggtcaaatcggatccaatcccccatctgcctcaccatcaccagcgccacccatg
aatccgggttctgtagcccaaatgggctccctccctgcctcgggttgtagcactccggtg
tctttcattggatccaatgcggcatctccggcttctggcccgggtaccccgagttccgcc
ccccaaggacatgcctcttcgggacaagtggctcacggtccgggtgatgcggtcgcaagt
ccagtccctccgccctctggcatgatggaataa
DBGET
integrated database retrieval system
