KEGG   Acropora digitifera (stony coral): 107340339
Entry
107340339         CDS       T04352                                 
Name
(RefSeq) general transcription factor IIH subunit 3-like
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03022  Basal transcription factors
adf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107340339
  09124 Replication and repair
   03420 Nucleotide excision repair
    107340339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adf03021]
    107340339
   03400 DNA repair and recombination proteins [BR:adf03400]
    107340339
Transcription machinery [BR:adf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107340339
DNA repair and recombination proteins [BR:adf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107340339
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 107340339
NCBI-ProteinID: XP_015761211
LinkDB
Position
Un
AA seq 209 aa
MADENISNLLLVIVDANPVWWGRIAHEKTQVCEEQINLTHCVDSLMVFSNAHLMMKHNNC
LSFIISHTNTSKFVFPKEDNHITPDATQSDIPTDGKYEGFAEVNDAIVAELKALLTSDVS
ASKDDSSSDVPPTLLASALTMALCYIHRAEKECPVGQKLKSRILVLKAAPDVSTQYMAIM
NCIFAAQKSNTVIDACVLNEHSGFLQQVS
NT seq 630 nt   +upstreamnt  +downstreamnt
atggcggacgaaaatatttccaacctccttttggttattgtcgatgctaatcctgtgtgg
tggggaagaattgctcatgaaaaaactcaagtctgcgaggaacagatcaatttgacccat
tgtgtggacagtcttatggtattcagtaatgcacatttgatgatgaaacacaataactgt
ctatcattcataatatctcatactaacacaagtaagttcgtattcccaaaagaagacaat
catattactcctgatgctacacagagtgatattccaacagatggcaagtacgaaggcttt
gctgaagtaaatgatgctattgttgcagagttaaaagctctattaacttctgatgtttca
gcaagtaaggacgacagcagttctgacgttccaccaactctccttgcaagtgccttaaca
atggccttatgctatattcacagagctgagaaagaatgcccagttggacaaaagctcaag
tcacgcattttggtgttgaaagctgctccagatgtttccacccaatatatggcgataatg
aactgtatatttgctgcacagaagagtaatactgtgattgatgcctgtgtgttgaacgag
cactcaggattcttgcagcaggtgagttaa

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